Detailed information of HOLI00655.G57013 in Hydra oligactis

Genomic Location: HOLI00655:383715...384509
NR annotation: WP_105262811.1, tRNA pseudouridine(55) synthase TruB [Rhodoferax sp. TS-BS-61-7]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A1WLI1tRNA pseudouridine synthase B OS=Verminephrobacter eiseniae (strain EF01-2) OX=391735 GN=truB PE=3 SV=1
B2UAA5tRNA pseudouridine synthase B OS=Ralstonia pickettii (strain 12J) OX=402626 GN=truB PE=3 SV=1
Q8XZV4tRNA pseudouridine synthase B OS=Ralstonia nicotianae (strain ATCC BAA-1114 / GMI1000) OX=267608 GN=truB PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09157TruB-C_2Pseudouridine synthase II TruB, C-terminalDomainInterproscan
PF16198TruB_C_2tRNA pseudouridylate synthase B C-terminal domainFamilyInterproscan
PF01509TruB_NTruB family pseudouridylate synthase (N terminal domain)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014780FamilytRNA pseudouridine synthase II, TruBInterproscan
IPR015240DomaintRNA pseudouridine synthase II, TruB, subfamily 1, C-terminalInterproscan
IPR032819DomaintRNA pseudouridylate synthase B, C-terminalInterproscan
IPR020103Homologous_superfamilyPseudouridine synthase, catalytic domain superfamilyInterproscan
IPR002501DomainPseudouridine synthase II, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13767TRNA-PSEUDOURIDINE SYNTHASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0001522Biological Processpseudouridine synthesisInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006400Biological ProcesstRNA modificationInterproscan
GO:0009451Biological ProcessRNA modificationInterproscan
GO:0009982Molecular Functionpseudouridine synthase activityInterproscan
GO:1990481Biological ProcessmRNA pseudouridine synthesisInterproscan
GO:0006396Biological ProcessRNA processingInterproscan

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