Gene detail

Detailed information of HOLI00661.G36072 in Hydra oligactis

Genomic Location: HOLI00661:249278...251845
NR annotation: XP_012556509.1, retinoic acid receptor RXR-alpha-B [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q8T5C6	Retinoic acid receptor RXR OS=Biomphalaria glabrata OX=6526 GN=RXR PE=1 SV=1
Q5I7G2	Retinoic acid receptor RXR OS=Lymnaea stagnalis OX=6523 GN=RXR PE=1 SV=1
Q90415	Retinoic acid receptor RXR-alpha-B OS=Danio rerio OX=7955 GN=rxrab PE=2 SV=1

Gene family	Subfamily
Transcription Factors Family	ESR-like
Transcription Factors Family	Miscellaneous
Transcription Factors Family	NGFIB-like
Transcription Factors Family	RXR-like
Transcription Factors Family	SF-like
Transcription Factors Family	THR-like

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00104	Hormone_recep	Ligand-binding domain of nuclear hormone receptor	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050200	Family	Nuclear hormone receptor family NR3 subfamily	Interproscan
IPR013088	Homologous_superfamily	Zinc finger, NHR/GATA-type	Interproscan
IPR035500	Homologous_superfamily	Nuclear hormone receptor-like domain superfamily	Interproscan
IPR000003	Family	Retinoid X receptor/HNF4	Interproscan
IPR000536	Domain	Nuclear hormone receptor, ligand-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48092	KNIRPS-RELATED PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000790	Cellular Component	chromatin	Interproscan
GO:0004879	Molecular Function	nuclear receptor activity	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0003707	Molecular Function	nuclear steroid receptor activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K08524	RXRA, NR2B1; retinoid X receptor alpha	-	Nuclear receptors	ko03310	deepkoala