Gene detail

Detailed information of HOLI00664.G59433 in Hydra oligactis

Genomic Location: HOLI00664:132211...135332
NR annotation: XP_047132510.1, zinc finger matrin-type protein 5-like [Hydra vulgaris]

Gene Structure

Sequence

Gene family

Gene family	Subfamily
Transcription Factors Family	zf-CCCH

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06220	zf-U1	U1 zinc finger	Domain	Interproscan
PF00642	zf-CCCH	Zinc finger C-x8-C-x5-C-x3-H type (and similar)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036236	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan
IPR013085	Domain	U1-C, C2H2-type zinc finger	Interproscan
IPR036855	Homologous_superfamily	Zinc finger, CCCH-type superfamily	Interproscan
IPR000571	Domain	Zinc finger, CCCH-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16465	NUCLEASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005689	Cellular Component	U12-type spliceosomal complex	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K13152	ZMAT5; U11/U12 small nuclear ribonucleoprotein 20 kDa protein	-	Spliceosome	ko03041	deepkoala