Gene detail

Detailed information of HOLI00728.G29409 in Hydra oligactis

Genomic Location: HOLI00728:27665...100426
NR annotation: XP_047138290.1, TNF receptor-associated factor 5-like isoform X1 [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q60803	TNF receptor-associated factor 3 OS=Mus musculus OX=10090 GN=Traf3 PE=1 SV=2
Q6DJN2	TNF receptor-associated factor 6-B OS=Xenopus laevis OX=8355 GN=traf6-b PE=2 SV=1
Q61382	TNF receptor-associated factor 4 OS=Mus musculus OX=10090 GN=Traf4 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21363	TRAF3_RING	TNF receptor-associated factor 2/3/5, RING domain	Domain	Interproscan
PF02176	zf-TRAF	TRAF-type zinc finger	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR049440	Domain	TNF receptor-associated factor 3/5, RING domain	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR001293	Domain	Zinc finger, TRAF-type	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10131	TNF RECEPTOR ASSOCIATED FACTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0033209	Biological Process	tumor necrosis factor-mediated signaling pathway	Interproscan
GO:0070534	Biological Process	protein K63-linked ubiquitination	Interproscan