Gene detail

Detailed information of HOLI00729.G60169 in Hydra oligactis

Genomic Location: HOLI00729:2215...2769
NR annotation: XP_002158122.1, vam6/Vps39-like protein [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q96JC1	Vam6/Vps39-like protein OS=Homo sapiens OX=9606 GN=VPS39 PE=1 SV=2
Q8R5L3	Vam6/Vps39-like protein OS=Mus musculus OX=10090 GN=Vps39 PE=1 SV=1
Q8L5Y0	Vacuolar sorting protein 39 OS=Arabidopsis thaliana OX=3702 GN=VPS39 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00780	CNH	CNH domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR001180	Domain	Citron homology (CNH) domain	Interproscan
IPR032914	Family	Vam6/VPS39/TRAP1 family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12894	CNH DOMAIN CONTAINING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006914	Biological Process	autophagy	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0016192	Biological Process	vesicle-mediated transport	Interproscan
GO:0034058	Biological Process	endosomal vesicle fusion	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K07565	NIP7; 60S ribosome subunit biogenesis protein NIP7	-	Ribosome biogenesis	ko03009	deepkoala