Gene detail

Detailed information of HOLI00787.G22622 in Hydra oligactis

Genomic Location: HOLI00787:280124...300750
NR annotation: XP_002163195.1, 3'-5' ssDNA/RNA exonuclease TatD [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
E3G381	3'-5' ssDNA/RNA exonuclease TatD OS=Enterobacter lignolyticus (strain SCF1) OX=701347 GN=tatD PE=3 SV=1
Q9L6M2	3'-5' ssDNA/RNA exonuclease TatD OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=tatD PE=3 SV=1
D0Z9R0	3'-5' ssDNA/RNA exonuclease TatD OS=Edwardsiella piscicida OX=1263550 GN=tatD PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan
PF01026	TatD_DNase	TatD related DNase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR032466	Homologous_superfamily	Metal-dependent hydrolase	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR050891	Family	TatD-type Metallo-dependent Hydrolase	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR001130	Family	3'-5' ssDNA/RNA exonuclease TatD-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10060	TATD FAMILY DEOXYRIBONUCLEASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0008310	Molecular Function	single-stranded DNA 3'-5' DNA exonuclease activity	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0016788	Molecular Function	hydrolase activity, acting on ester bonds	Interproscan