Detailed information of HOLI00826.G32143 in Hydra oligactis

Genomic Location: HOLI00826:1...161472
NR annotation: XP_047139337.1, tetratricopeptide repeat protein 37-like isoform X2 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6PGP7Superkiller complex protein 3 OS=Homo sapiens OX=9606 GN=SKIC3 PE=1 SV=1
F8VPK0Superkiller complex protein 3 OS=Mus musculus OX=10090 GN=Skic3 PE=3 SV=1
O94474Superkiller protein 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ski3 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07719TPR_2Tetratricopeptide repeatRepeatInterproscan
PF13432TPR_16Tetratricopeptide repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013105RepeatTetratricopeptide repeat 2Interproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR039226FamilySki3/TTC37Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15704SUPERKILLER 3 PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0006401Biological ProcessRNA catabolic processInterproscan
GO:0034427Biological Processobsolete nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'Interproscan
GO:0055087Cellular ComponentSki complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12600SKI3, TTC37; superkiller protein 3-Messenger RNA biogenesisko03019deepkoala

TOP