Gene detail

Detailed information of HOLI00845.G34137 in Hydra oligactis

Genomic Location: HOLI00845:326360...328579
NR annotation: NP_001296713.1, paired box protein Pax-3-like [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
P53544	Homeobox protein goosecoid OS=Danio rerio OX=7955 GN=gsc PE=2 SV=1
P29454	Homeobox protein goosecoid isoform A OS=Xenopus laevis OX=8355 GN=gsc-a PE=2 SV=2
P53546	Homeobox protein goosecoid isoform B OS=Xenopus laevis OX=8355 GN=gsc-b PE=2 SV=1

Gene family	Subfamily
Transcription Factors Family	Homeobox

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00046	Homeodomain	Homeodomain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001356	Domain	Homeobox domain	Interproscan
IPR050649	Family	Paired Homeobox Transcription Factors	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24329	HOMEOBOX PROTEIN ARISTALESS	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0000977	Molecular Function	RNA polymerase II transcription regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K21951	HOXA11; homeobox protein Hox-A11	-	Transcription factors	ko03000	deepkoala