Gene detail

Detailed information of HOLI00974.G33061 in Hydra oligactis

Genomic Location: HOLI00974:168731...221597
NR annotation: XP_047142588.1, ankyrin repeat domain-containing protein 55 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

HOLI00974.g33061.t1

ATGATTTTACAAAACAAAGACTTTCAGCGTGTTGTTAAAGAAATTAAATCCTTTCTTTCAAATTTAAATAATAGCGAAAGCTCTGCTGAAATAAGAGATGTTCTTAATTTTGCATTACTACATCTGCACAAATATTTTAAGAAAGTCAAAAATCATATAAAGTCTGCTACTTTAAACTTGGACAGTAGTATTTCACTTCAAAATTCGTTTGGATCACAAAGCTTACCATTGATCATACAACCTCAAGAGAAATTTTATTGGAATTGGATAAATCTAGATAGTCATGTTTTTAGTGCAACGTTTGGATTTAAAAAAATAAACCATGAAATATTCCATGTTCTCAAGGTAGCCGACATTGATATGCTGAAGGACCTTATTGAAAAAGACAACAGTTGCATAAAAGAAGTTGACACGTTGGGTCGTTCTACAGTGTTTTATTGTATCAATGGAAATGAGGTAGGGCATCTTGAGTGTTTAAAAATGTTATTGAACTATGATGTTGATCTTTCACAAGAATCACAAGATGGACTTGGATGTGTTCATTTGGCAGCCATAATGAATAATAAGAAAGCTCTTGAACTTATGTTGAGTTCAAAGAAAATATCTATCAATAATAAAAACCATAATGGAATTTTTCCTATTCACTATGCAGCTGGTTATGCAAGTGTTGAATTTTGTGAGTTACTTATAAGTAGTGGAGCTGATATCCATTGTTTGGACAATGATGGAATGAATGCTTTAATGTGGGCATGTTATTTTGATAAAGTAGAAAATTTTAAATTTTTTTTTAACCATGGATTTGAGAATGAAACAATATTTGAATCCATCGACACAGAAATTCAAAGTTGTGATAACAAAGGAAGGTGTGTGCTGCACTACAGTGCAATGAAGAGCGAAAGTAGTCTATGTTTAAAAATGTTGCTGAAGCCGCATTTTAAAGAAAAAATTGATAATGAGGGGAGAAATATTTTACATTATATAGCTGAGCATGGGGCGTCTGAAGCTTTAAAAGAATATTTACAAGTATGTGGCAATGACTTTTTGAATTCTATTGATTTAATGGGGAAAACACCATTGCATTTAGCTTGTATGTGTGGCCATGGGCAAATCATTGACATGTTGTTAAACAAAGGAGCTTCACTTGATCTAAAAGACAGACAGGGTTTTACTCCTTTTGATTATGCTAGGTCTAAAAATCTTCATTACTGTCATCTTGTATTTCAATATCATCAAAAGTATAGAGAGAAAGATCACAACAAGAAATCGAGCTTTAAGCCAGTACAAACCAAATTGGCAGAGAAAAAACCCAGCCTAGAAGATACTATTGAAACTGCTGAAATTAAAGACAATCTAAACATAAGGCGCTTATCTATTGATTCAAATTTGGATGAAGACTTCGATGTGCATGAAGGTATAGATTACAACGATGATAGTAGTTCAACCGAAGAAGATGAAGCTCAATGCAACAGTCATAGCAACACTGTGAAAAATTTATCCACCAAATCTTCAGCCCATGAAATAGATTATTCTCAAGAAGGTTTTGAAAATGACTCACCAACAACCAAAGACTCTCATTATGGAGAACTTTCTTATACAAAAGAAGAAAATTTGCTTGGAGTTAAGAAAAAATCTATGGTTTTTCCTGTTAGTTTAAAAAATGATCTAGCCATGATGTCAACCAATTTTGAAAATAGTGACTTTGATGATGCAAGGCTTGACGTTGATGCAGAGGAGGGTTCTATATCACCTGTTACACATTTTAGAAACTGCAAGCCCACAGAAATGCTAAATGTACAGCCTGGAGCAAAGTTTGCTGAGAGAAGTGATAAATTTATTAAGCTCAATGTTGATCCAAAATACAAAAAAGTTGCTGATAGCAATATGTCATTAGATTTTCAAGAAAATATTTGTAAAAGATCATCAAACCAAAAACTATCTACGACTGTTAATAGTCAACAACCTAAACCCCCAGAGAGAAAAGTCTTGAATGATGTTATAAGCAATGAAGAGCAGCTTGGATGGCCAAAACATCCGATATCTAATTCTAAAAGGCGCATAGAGATATCTCGCAATACGCAACCTCGTACATTGTCTTTAAATAGTCACGAAATCAAGGAAAACTCATTCAGGTCTCTGGGACAATCGTGGCCACTTTTAAACAAAAATCATGGTATGTTAGAAGAAAAACCTAAATATTTGACTAATAACGGAGTCTCTCTTCTTCCTATAAATGCCCCAAGCGCGAGGTCTGCATCGTTGGTTAATTCAAAAAAATAA

Transcript

HOLI00974.g33061.t1

Protein

Uniprot

Uniprot term	Description
O75762	Transient receptor potential cation channel subfamily A member 1 OS=Homo sapiens OX=9606 GN=TRPA1 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR002110	Repeat	Ankyrin repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24178	MOLTING PROTEIN MLT-4	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0030315	Cellular Component	T-tubule	Interproscan
GO:0036371	Biological Process	protein localization to T-tubule	Interproscan
GO:0055117	Biological Process	regulation of cardiac muscle contraction	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K19626	INVS; inversin	-	Cilium and associated proteins	ko03037	deepkoala