Gene detail

Detailed information of HOLI01087.G37716 in Hydra oligactis

Genomic Location: HOLI01087:215310...215732
NR annotation: WP_141290192.1, signal recognition particle protein [Ideonella azotifigens]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P0AGD9	Signal recognition particle protein OS=Escherichia coli O157:H7 OX=83334 GN=ffh PE=3 SV=1
P0AGD8	Signal recognition particle protein OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=ffh PE=3 SV=1
P0AGD7	Signal recognition particle protein OS=Escherichia coli (strain K12) OX=83333 GN=ffh PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00448	SRP54	SRP54-type protein, GTPase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR000897	Domain	Signal recognition particle, SRP54 subunit, GTPase domain	Interproscan
IPR022941	Family	Signal recognition particle, SRP54 subunit	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11564	SIGNAL RECOGNITION PARTICLE 54K PROTEIN SRP54	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005525	Molecular Function	GTP binding	Interproscan
GO:0006614	Biological Process	SRP-dependent cotranslational protein targeting to membrane	Interproscan
GO:0003924	Molecular Function	GTPase activity	Interproscan
GO:0048500	Cellular Component	signal recognition particle	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K12881	THOC4, ALY; THO complex subunit 4	-	Spliceosome	ko03041	deepkoala