Detailed information of HOLI01150.G28756 in Hydra oligactis

Genomic Location: HOLI01150:14350...31976
NR annotation: XP_047139268.1, 5'-3' exoribonuclease 1 isoform X2 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P977895'-3' exoribonuclease 1 OS=Mus musculus OX=10090 GN=Xrn1 PE=1 SV=1
Q8IZH25'-3' exoribonuclease 1 OS=Homo sapiens OX=9606 GN=XRN1 PE=1 SV=1
P221475'-3' exoribonuclease 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=XRN1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18332XRN1_D1Exoribonuclease Xrn1 D1 domainDomainInterproscan
PF18334XRN1_D2_D3Exoribonuclease Xrn1 D2/D3 domainDomainInterproscan
PF17846XRN_MXrn1 helical domainDomainInterproscan
PF18129SH3_12Xrn1 SH3-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027073Family5'-3' exoribonucleaseInterproscan
IPR047008Homologous_superfamily5'-3' exoribonuclease 1, SH3-like domain superfamilyInterproscan
IPR040992Domain5'-3' exoribonuclease 1, D1 domainInterproscan
IPR047007Homologous_superfamily5'-3' exoribonuclease 1, D1 domain superfamilyInterproscan
IPR041106DomainExoribonuclease Xrn1, D2/D3 domainInterproscan
IPR041412DomainXrn1, helical domainInterproscan
IPR041385Domain5'-3' exoribonuclease 1, SH3-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR123415'->3' EXORIBONUCLEASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
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