Gene detail

Detailed information of HOLI01156.G42099 in Hydra oligactis

Genomic Location: HOLI01156:114842...204240
NR annotation: XP_012556473.2, kinesin-like protein KIF21A isoform X1 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

HOLI01156.g42099.t1

ATGATACATCTGTTCAAGTTGCTCTTCGAATTAGATCCCCAAAATGCTTCTGAGAAAATCGATTTATGTCATATATGTACATCAGTTACCCCTGGTCACCCTCAAGTTGTGCTTGGCAAAGATAAAGCATTTACCTATGATTTTGTCTTTGACTTAGATTCTCATCAACAAGATATATATAAAGAAATTGCAAAACCTCTTATTGAAGGTTGTTTTGATGGATATAATGCTACCATACTTGCTTATGGACAGACGGGTAGTGGAAAAACTTATACCATGGGAACTAGTTTTGATATTGGTGTTAGCGAAGATCAAATTGGCATTATCCCTAGAGCAGCTAAACATCTTTTTGATGGAATGCGAATGCGAAAAGAAGAGGCTGAGAAGGCTGGTCGACCTTCTCCAGAATTTACAGTTACAGCCCAGTTTCTTGAGCTTTACAATGAGGAAATAGTGGATCTTTTAGACATTGAAAACAAAGGGAAAAAGTTGATCAGAGTTCACGAGGATCACAATGGAAACATATATTTAACAGGTGTTGTTGCTAGACCTGTATCTGCTGCTGACACTTGTATGGCATTGTTGGAAGAAGGTGCTATTTCTCGATCTACAGCTGCGACAATGATGAATGCAACATCATCAAGGTCTCATGCTATATTTACACTTTTCATTAAGCATCACAGAATTTCACAATCGGATGATGGTGAAGAATTCGAAACGCTAAATGCAAAATTCAATTTTGTTGATCTGGCTGGATCAGAGAGACTAAAAAGAACTGGAGCTACTGGCGATCGAGCAAAAGAAGGAATCTCTATTAATCAAGGATTACTATCACTAGGCAATGTAATAAGTGCACTTGGTGACAAAACTAAACGTGGTTCACATGTACCTTACAGAGACTCAAAACTTACAAGATTGCTGCAAGACTCACTGGGTGGTAACAGCCGGACTCTAATGATTGCCTGCTGCAGCCCCTCAGACCGTGATTTTATGGAAACTCTTAATACACTGAAGTACGCAAACAGAGCTAGAAATATAAAAAACAAGGTAATTGTTAATCAAGACAAGGCAAGCAAACAGATTGCTTTGCTGCGACAAGAGATTCAGCAAATTACATTAGAACTAATGGAATATAAACAAGGTAAGCGGATTGCAGATGGATCTGGAGAACATATGACGGATACTTTTCAAGAGCTTAACATGCTGAGAACGGAAAATGAGACACTTCGTATGCGTGTAAAAGCATTGCAAAAGAACATTGAATCTAAATCTATACAACTTACTGAGTTAAAAATATCTTCTGTTCTTTCGAACTTAACAGAAGAGGAAAAAACTACTTTTGAAGGCATGGTTACCTCTTATGAAACAAAGATACAGGATCTAACTACAAAGCTGGCAGAAAGTGAAGAATTATCAAGTGCAGCAATAAGACGTGCTCAAAATGTCAGTCGTGTTGCAATGTCACCAGGTACATGCCAGGAAGATGAGCAACTGGTTTCATTTATAGATGCTGCAAAAGATCATTTGAGAGCAGAAAAAAATAAAAAAAAGAATATGAAAAAAGTTAGAAAAGAAATTTTATTTGAAGAATCTACAGAAAAATCGAGTCCAGAGAGCGGAGTTGTTATGAATGATGAAAATGATGAGGATGACGAGAAAAATGAAAATAATATGGTGATTGAAATAAATGAATGTCATATTGATGAAGAAGATTCTCACAACGAAGAAGAAGATGATGATGTAGCATCCAATACAGATTCTGACGATGAAGATGCTTTAAATCAGTCTTTAAAAAATGAGGAAGCAATGCAGAACAACATTAATGATTTAGACACAGATATTACAATTAAACAAAAACTTATCGATGAGCTTGAACACAGTCAACAGCGCTTAACAGCACTTAAACAGCAGTATGAGCAAAAGATGATTCTGCTTCAAAATAAGATCAAAGAAACGGAATCAGAGCGTGATAAGGTTTTAAAAAGTATCGGATCTGTTGATCAACTCGCGCGCTCAAAATCGGATGAAGTTCGTAAACAATATGAAAAAAAATTGGTTACTATGCAAAAAGAACTGTCAAAGTTACAAAACTCTAAAAGGGAACACCAAAGACTTTTAAAAGCAAAAGAACAAAATGAACAGCAGTTAAAGTTGATGCGAGATGAATTAAATGATATGAAACGAACAAAAGTTAAGTTGATGCGTGCAATGCGTGATGAGAGCACAAGAAACAAGAAAATGGAGAGCAAGTTTAATCAACAAATGGAAACCATGCTTAAAGAAAACAGAAAAAAAGAATATGAACTTAAAAAAATGAAAGATGACAAGAAACAAAGAGATCTGGTACTGAAGCGTAAGCAAGAAGAGCTTAATGCAATGAGAAAACAAGTAAAACCAATTTCAGCAGTTCCTGAAACACCTCCTCCTATTTTACAAGACCCAAGTAGATTTGATTCTTTGACTAAAAGTCTGCGTTCACCAGCTGTATCAAAGAAAGCAAAACAGAAATGGGAAATTTTAGAAAGAAAATTAACTGACCTGGCTATTCGTATGAAAAATGTAGCACAAATGGAAAATGACATGGAAAGATGGTTGGCAGAGAGAGATAGAGTTAGTAAACAGCTTGATGCAGCGAGGCGAAGAAAAGAAATTGCAGAGAAAAAGAACAACCTGGAAGACGTAAAAGATTTAAACAGCCAATTGGAAGGTTTGGAAGCTCATCTAGATTATATTCAAGAACATGTTACAGAAAGTCAAGGTACAATAATGGGAATGGAGGATGAAGGAGAAGGAATAAATACTGCTGATGTCATCAACACATGCACATTGACAGAATCTAAATATTTATTGGAACATTTTTATAGCAAGTCTGTTGAAATGGCTCAAGAGTTAGCAAACAAAGATGCAGCATATAAAGAAATTCAGATTAAACTAGAAGCTATGGAAAAGCATTGCGAAGTCCAACAGCAATTGCTTCAACATGCGTGCAATCTTGAACATGGAGGAGATATTGTAGAAGCTGATGATATAGAAGAACCTTTACATGATGTTAATGTTCCGACTCTAAGAAAATCTCGTAGAAAAACTGCTCTACCAGAAGAGCTATTGCATCCGAAAGAAAAGAAACCTTTGGAAATTAAAAACGAAGATGAAAATAAAGAAAATTTACAAACTATAGATAGAAAAAAAGAAATAGCAGAGACTTTTCAATTAGACGAAAAGACTTTACAAAAACTTGTTGAACTAGAAAAATCATTAAAAGATAAAAAAAATGCCTCCGCCACAAGAAACAAAAAAATATCAAAATCTGCCCGACCTTTTGTTAAATCATCCTCAACAAGTAATTTAAAAGCTGCAGTTGCAAAAAGACCATCTTCAACTCGCGGTTCACCCATAAACGAAAGAAAAAATATTGCTGATGCAACACCAACAAGTCTTTTGGAATCAGAATCAAATGATGTTTTTAAAAGACTAACAAGCAACCTACCGACAGAGGGTGACCCTGACGTTGGACAGATTCTTCCATCTAAAGTATCTCAAGGAAAACCAGAAGTGTTAGTGTGCATGTATACAGCTACAGGTCATAATAATGCAGTGCTATCATTAGATGTTCAAGATAACCTCATGGTGTCTGGTTCTAAAGATCGAACAGCAAAGGTATGGGATTTAACACAAAATGAAGAAATTTTATCATTGAATCAACATAAGCGAGATGTAGCTGTTGTCAAATTTTCTCCTTTACGAAATGTTATCTTTACTGTCTATCAATCTACAATCAAGCTTTGGGATCTCAGAAAAGGTTCTGTGATTAAAACATTGGGTAGTGGCTTGTTGCAGTCAATGAGTGATGCTAGCATCATGGATCTAGGTTTGAATTCTCAGGGGACTGTTTTATATTCTGCCATTGGAAACATTGTCAAAATGATTGACTTACGCACATATAGCACTATAGGTAAATTAACCGGACACACTGGAGCTGTTACTTGTTTGTTAGTGGCAGAAACTGGTCATAACCATGACAACATTATCACTGGTTCAAAAGACCATTCTATAAAAATTTTTGAGGTAGTGGATGATGTTTCATCAACCCAGATGCCTCGTCAAAATTTGGAACCACCACATTACGATGGTGTGCAATCACTTGCCATGAAAGATAAGTTTTTGTTCAGTGGATCTCGAGACAATACAATAAAGCGTTGGAATTTTACTAACCATCGGTTGGAAGAGCATCTAACAGCTGCACACAAAGATTGGGTTACAGCCTTGAACTTTATACCAAATGAAAATATACTTATTAGCTCTGATAGGAGAGGTGTTGTCAAACTATGGAATGCTAACACCTGTAAATTAGCAGGTGAAATGCTCGCTCATGGTAAAAGCATAAATGCGATCAAATGTGATGAATCTCGAATTTTTACAGCGTCTAGTGATCGATTAATTCGAATCTGGAAACCTTCGCCTGTACTGCTTGAAGATTTATCATCAAAAGAAGAGCAGGCATCCTAA

Transcript

HOLI01156.g42099.t1

Protein

Uniprot

Uniprot term	Description
Q7Z4S6	Kinesin-like protein KIF21A OS=Homo sapiens OX=9606 GN=KIF21A PE=1 SV=2
O75037	Kinesin-like protein KIF21B OS=Homo sapiens OX=9606 GN=KIF21B PE=1 SV=2
Q9QXL2	Kinesin-like protein KIF21A OS=Mus musculus OX=10090 GN=Kif21a PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan
PF00225	Kinesin	Kinesin motor domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036961	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan
IPR001680	Repeat	WD40 repeat	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR001752	Domain	Kinesin motor domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR027640	Family	Kinesin-like protein	Interproscan
IPR019775	Conserved_site	WD40 repeat, conserved site	Interproscan
IPR019821	Conserved_site	Kinesin motor domain, conserved site	Interproscan
IPR011047	Homologous_superfamily	Quinoprotein alcohol dehydrogenase-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47969	CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0003777	Molecular Function	microtubule motor activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0007018	Biological Process	microtubule-based movement	Interproscan
GO:0008017	Molecular Function	microtubule binding	Interproscan
GO:0005875	Cellular Component	microtubule associated complex	Interproscan
GO:0007052	Biological Process	mitotic spindle organization	Interproscan
GO:0051231	Biological Process	spindle elongation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K24185	KIF21; kinesin family member 21	-	Cytoskeleton proteins	ko04812	deepkoala