Gene detail

Detailed information of HOLI01174.G54234 in Hydra oligactis

Genomic Location: HOLI01174:46806...57659
NR annotation: XP_047123647.1, tyrosine-protein kinase transmembrane receptor Ror isoform X1 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

HOLI01174.g54234.t2

ATGTCACATGAAAATAAAAGTTTTACATTTCAAATGTTTTATGTTAAAAAAGATTTGAATGCTTTTAAAAAAGTGTTGTTTCAATTAAACAGAGCCGAAGATAAAGACGACTTCTATACCAAATTATCAAAAAATGCTGGAATGTGTCATGTTTATAATGGCGAGGAATGCAACGAATATTTGGGTAACAAACATGTATATGTTACCAATGATGGATCAATAGCTTTGCTAGAAAAAAAACTCAAACGCTGGTTTCAACAGACACAAGAAGCAGCCATAATAAATACAGAATGTTGGGAACATGCTAAGGCCTACACTTGCTCTACATGGTTTCCAGAATGCAATCCAATAACAAACAAACCCACTCAGCGGCCTCTTTGCTCAGAACACTGCGATTTTATGCAGACACACGTGTGCAAAGGGGAGTTTAAAAGAGTGCGCCACTCGCCCTACTATCAGCTTTTTTTACCACTATGCGAAAAAGTTTCTTTAGTTGACGATTCGGATGGCTCAAGTTGTTACTTTCTTCCGACGGTTGATCTCCGTAAAGGTCCTATACCTTTTGCCGAAACACAAAAACCCGTAAGACGTGAATTAGGAAAATCTGTAACTCTAAAATGTAAGTTTGGAATTCGCAATTTTGTATGGAATAAAGAAAATTCAGCAATGATAACAGAAGGAACATGGTATAGAGACCGTCGAAGAGTTGTTGGGAACGAGAGGGTACAAATGAAAACAAAACAAAAAGGCGCTTCTCGACTTTTTATGATGCTTAAAATAAAGCACCTCATTCAACGAGATCAAGGTCGATATACCTGCATTATTCGTTTTGGAAATATTACTGTCACATCTGTAGCTAGTTTAAAAATAAATTATTCGAAGGTTCCTATTGTAATACCACATCCGGAAAATGTATCTCCAACTCCAGATTTATCATTGATAACGAAGAATGATGTAGGGAAATGTGTGGCATATAAAGAAGGGATTTGTGCAAATTATTTAAACCAAGAAAAAACGTTCGTCGCTTTTGAATCAAGCGATCAATCGATTGAATCCCTTAATGAACGTTTAAGTTCTCTTATCATGACACTTCGGCAAAAGTCTTTAATTTCAAAAAAGTGTGAAGAATATAGTCTTACTGTAATCTGTTACAATATGTTTTCACAGTGTCATAATGTTACAAAATCTGTTCCAACCTTATGTAAACAAGACTGTAACTCATTCCAAAAATTTCTTTGCAAAAGAGAGCTTGAAATAATAGCGGAAGAGGCAGCGTTTCTGTCGTTGTATTTGCCAGATTGCGACAAGCTGCCTGAAAAAAATCCACACTGTATTCAAGCATATTTTACAAAAAAAAGACGTTCTTTTACAGAAATTCAAGGGAAGTCATTGAGAAAGAATGCTATTCACAATCAAGTTCAAGAAATGCGTTGTTACGACGAGGAATCAACGGATAATTACTTAGGAACTCTATCAATAACAGAATCTGGAAAACTGTGCGATATATGGAGCAAAAATCCCAAGTACGCTAATATCTCACACGATTACTGTCGAAACTTCGGAGAAAGTCAGCCATGGTGTTTTGTTCAAAGTAAGAAACAATACTGCAGCATAAAACGATGCAAAAAAGAAGATTGGTTTGACCCAGTTTGTTATAAAAGCAAAGAACTAGGCTATTACGGTAAAGTTTCTAAAACAAAATCAGGAAAAAAATGCGTAGAATGGAATTCTATTGCTTCTCTGCGTTATAGCAATGTTGAACATTCATACTGCCGAATGTATGAAGACATGGAAGTACCCTGGTGTTACGTTGATCAACATACTAAGGAAGTTTGTAATATCCCTCAGTGCACTGACACAGATACCAATACGTATTCTAGCATTGTTTATATTATACCAATATTGGTCGGAATATCAGCAATTATATTCTTTGCTATTCTCGCTTTGTTTTATTTACGCAATAAAAAAATTGTTCGGGATCGCACGACTCTGGCACAAATTTCCGAAAAAGAACCACAAATTGGAACTTTATCTTCGACTACCAGCTTCCTTGATGTACAAAAGACTGCCATAGAAAGCCCCAATTCTGCTTCATTTAAAAAATCATCGAATACAGATGGCATAAAGAAAAGTAAGGTTGCAACAGTGAAAGAAGGAAGCTTACATAAATGCAAAAAACTAGGTGAAGGAAGATTTGGTCAGTTATGGTATGGGGAATACGCTATCCGTAGAAATAATACAATACCTGTGCTTATTAAACAGTTAGCTCCAGAAACTCGTTCATGTATTATAAGTGAGTTTCGAAAGGAAATGACTATGCTGAGAGATTTAAAACACGAACATGTGCAGCCTGTTGTTTGTGTATCGGCAATGAGTGAACTACCTTTCATGGCATTTGAATATAAAAACCAAACAGACTTAAAAGAATTCTTACAACTTAATAAATCAATAGATACCACGATTAAATCGAATATTATAAACCAGCTAGCTTCTGGTGTCGAATTTCTGCATTCTCATAAGATAGTTCATAAAGACTTAGCAACTCGTAATTGTTTAATATCAACAGACGAGTTAGTCCAAATATCAAATTCAGGACTCGGTATCTATAAATATCCCGAAGAATATAATATTTTACCAGGTTTAGGCTTAGCACCGATGCGATGGCTTTCTCCAGAAACATTACTTACAGGAACATATAATGCAAACACCGATGTTTATATGTTTGGGATTCTCATGTGGGAAATATTTTCTTTAGGAGAAATTCCATTCGAAGAATTTACTAACGACCATGTACTTTCATTACTTTCACACGGGGGTAGTTTATTAGGCCGTCCAAAAAACTGCCCTAACCACTTTTGGTCTGCAATGACAAACTGTTGGACAACATCCAATGTTTGTCTTGAAAATAACTTAATGTGA

Transcript

HOLI01174.g54234.t2

Protein

Uniprot

Uniprot term	Description
Q01973	Inactive tyrosine-protein kinase transmembrane receptor ROR1 OS=Homo sapiens OX=9606 GN=ROR1 PE=1 SV=2
Q24488	Tyrosine-protein kinase transmembrane receptor Ror OS=Drosophila melanogaster OX=7227 GN=Ror PE=1 SV=1
Q9Z139	Inactive tyrosine-protein kinase transmembrane receptor ROR1 OS=Mus musculus OX=10090 GN=Ror1 PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07714	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan
PF00051	Kringle	Kringle domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR000001	Domain	Kringle	Interproscan
IPR041775	Domain	Ror-like, cysteine-rich domain	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR050122	Family	Receptor Tyrosine Kinase	Interproscan
IPR038178	Homologous_superfamily	Kringle superfamily	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR001245	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR013806	Homologous_superfamily	Kringle-like fold	Interproscan
IPR020067	Domain	Frizzled domain	Interproscan
IPR008266	Active_site	Tyrosine-protein kinase, active site	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan
IPR036790	Homologous_superfamily	Frizzled cysteine-rich domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24416	TYROSINE-PROTEIN KINASE RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0004714	Molecular Function	transmembrane receptor protein tyrosine kinase activity	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0007169	Biological Process	cell surface receptor protein tyrosine kinase signaling pathway	Interproscan
GO:0007275	Biological Process	multicellular organism development	Interproscan
GO:0033674	Biological Process	positive regulation of kinase activity	Interproscan
GO:0043235	Cellular Component	receptor complex	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K05129	MUSK; muscle, skeletal, receptor tyrosine kinase	EC:2.7.10.1	Protein kinases	ko01001	deepkoala