Gene detail

Detailed information of HOLI01298.G15106 in Hydra oligactis

Genomic Location: HOLI01298:192450...193035
NR annotation: WP_208933354.1, ribonuclease R [Rheinheimera sp. F8]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P21499	Ribonuclease R OS=Escherichia coli (strain K12) OX=83333 GN=rnr PE=1 SV=2
P30851	Ribonuclease R OS=Shigella flexneri OX=623 GN=rnr PE=3 SV=4
P40611	Ribonuclease R OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) OX=223926 GN=rnr PE=3 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00773	RNB	RNB domain	Domain	Interproscan
PF17876	CSD2	Cold shock domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012340	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan
IPR050180	Family	RNR Ribonuclease	Interproscan
IPR001900	Domain	Ribonuclease II/R	Interproscan
IPR040476	Domain	RNase II/RNase R, cold shock domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23355	RIBONUCLEASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000175	Molecular Function	3'-5'-RNA exonuclease activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0004540	Molecular Function	RNA nuclease activity	Interproscan