Gene detail

Detailed information of HOLI01343.G41314 in Hydra oligactis

Genomic Location: HOLI01343:162092...208140
NR annotation: XP_047129137.1, polyamine-transporting ATPase 13A3 isoform X1 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

HOLI01343.g41314.t1

ATGACAGGTAGAAGAAGTTTAGATCTATGCTGTCTGCAAGAGATTTTCTTGAAAGGTGGGAGTGCTAAGACTATTGGATATGATGGTTGTTGGTACAAATTCTTCTGGGTTGGATGTGAAGAAGGAGTGTCAGGTGTTAGTATTTTAGTGGAAGAAAAATGGATAAATCATGTAGCTGAGATTAGAAGAGGAGGGCGAGAGAAAAAAAAAGAAGAATTTTACATTGCTCTAGGTAGTATTTTAAAGAATATTGGTGAGAATGAGAAGCTGATAATATATGGAGACTTAAATGGGTATGTTGATGCAGCTACAGATGACTTTAATAGAGTGCATGGTGGAAAGGCGTTTGGCCTAAGAAATACAGAAGTAGAGATGTTGTTGGAGTTTTCAGATGCAATGGGATTAACAGTCTGTAATACATGGTTTACAAAAAAGGATCAACAGAAAATAACTTATGAGTCAGAATACAAGAAGATAGTGGTGCACGCCGAATCAGAAGATGAGTTCACGGTTCACTTTTATTGCGAAAATTGGGTTTTCACCATTTTATTTTTTATCTCGGGTGTTTTTACAGCTGGAATAGTTTTTCTCGTGGGTTACTGGTATCCAAGTCGTCGCTTAATTTTTACTCATAACCAATGCAACACAAAAGAAGCTTCTTCAGTGCTAATTAAAAAATCCGACACAAAACAACATTTTGTTTCCAGAATAAATATTCTGCTTAGAGAAAGATGTGGTATCGAAGATTTCGAGGATGATTATACAGACTTTGAACAATATTTAATGAACCAATCGAATTTACGGTATTTCGAATTTACGTTTTTGCGTTATATTATTTGTGAAAACACAATTATTCCACTGGCTGATGCGGCAAACAAGTGGAGTTTTTCAGACATCCGCCGCTGCAAAAATGGAATTCATATAAACTCTGTATTAAATAAGTTAGCCATATATAATCTTTTCAGTGTAACGTTATGGTACGTTGAAGAATACTATTTGTATTCTACCTTCATATTCATAATGACGTTTGCGTCAGTATCGATAAACGCATACTTGACACAATTAGCAGTAAAAAAACTGCATGATATTCTACCTAAAGCAAAAGAAGTGCACACTTTGCAGCCATTAATAACATTCTCCGACGAATCATTCAAAATTATTTCAAAATCAACACGTGAGCTGGTTCCTGGAGATGTTTTAGTTATTCCTGCTGTTGGAATAGAGTTATCGTGTGACGTTGTTCTGTTAAGCGGAAGATGCGTTGTTAATGAAAGTTCATTAACAGGTGAGAGTATACCAAATGTCAAAACCGCTATCGAAGATTCATTAGAACCAGAATGCTTTTATAACGTTAATTTGCATAAGGAACATAGCATATACAACGGCACAACTGTTATACAAGCTCAAACTGACGGAGAAAATAAAAATGTTCTAGCATTAGTTGTTCGAACAGGATTTTATACATTAAAAGGAGATTTAATTCGATCTATTGTTTATCCAACGCCAATTTATTTGACATTTTCCAGTGACGTAGCAAAATATTTACTCTGCATTTCCGTTTTAGCAATATTTAGCTCTTTCTACACCATTTATACCTTTGCTAATAAAGGTTTAAGTAAATCTGATATAGCTCTGCAAGCACTTGATTTAATAACTGTAGTTATACCAGCTGCTCTTCCACTTATTCTGTCAATAGGTCTGATGAATGCATCTATAAGATTGAACATAAAAAAAATATTTTGTATTGATCCCAACCGCATAAATATTTGCGGAAAGGTTAAACTAGTACTTTTTGACAAAACTGGAACTTTGACTGACGATCATGTAACAGTTTCCGGGGTCGTACCCGTTATAAATGGAAAAGTAAAACTTTTTAATAGTGAATCAACTGGATTAACTAATACTCATTTGTTCAAAGCAATTTCTACCTGTCATAACTTGTCAATCATCGATGCTAAGACTTCAGGAGATCCAATTGATATGTATATGTTTAACTTTACTGGGTGTAAACTACATGATTCGGGTTTTAAGGAATTAATAAAATACGGAGATACATCTCTAAATTTTAAACCCTATATTAAAGCTATAGTTGTAATACCAGACACCAACAACGGCAACAAGTCTTTAGATATTTTAAAACACTTTACTTTTGAATCCTCTTTGCAAAGAATGACCGTCATAACTATTGATAACAACGATGAACTTATTGTGTACTCAAAAGGGTCACCAGAAAAAATACTGTCCATGTGTACTGATAGTAGTATTCCTAGTGGTATTAAAGAAGAAATTGCAAAGTATACCCGCGTAGGTAACCGTGTTTTAGCTGTAGCATACAAACTCATCTCTGAAATCACAGAATGGAGCGTACTAAACAGAATACCAAGGCATGAGATTGAGTCAAACCTTTTTTTGTGTGGTGTCATTGTTTTTGAAAATTTAATCAAACAAGAAACGTATGATACGATTAATACTCTTTTACAAGCAAATATAAAGTTAGCTATGGCAACAGGTGACGACCTTCTTACAGCTTCTTTTGTTGCAAGAGAAATTAACATGGTAACTCCGGATTATGATATCATTGAGTTATCATTCCCGAACGGAAATGAGGTGTACAAAAAATTAGAAAATCATAAAAAAACAATTTTTTTAGAAGAAAAATCAAAAGTCGACATTACCGAAACACAACATTCATCAAAATACAAAATGCAAGACTACAAACCGAATTTCTTACTTGCTCTAACAGGAGAGTCTTACGAGAAAATCCATCGAAGTATGCCACATTTACTCCCTAAGATCTTGGTTAGTGGAGTAATATTTAGTAGAATGTCACCCAATCAGAAAACTACTCTTGTTAAAGATTTCCAAAAGATTGGCTACGGAGTTTGTATGTGTGGCGATGGAGCAAATGATTGCGGTGCACTAAAAGCTGCTCATGCTGGTATTGCACTTTCTTACGCTGATGCATCAATAGCAGCACCTTTTACATCGAAAATATTCAATATATCATGCGTTCCAAATTTAATTATGGAAGGACGCGCATCGCTTGTGACAGCTTTTGGAACATTCAAGTACATGTTAACGAATGTTACCGCAGCTTTAACTCATGCGCCGGGGGGAGCAGACGAAGCTTCAATTCCTGCACCAGGAGGAGAAGACGAAGCTTTGGAACTTAAAATAGATTTCAATTAA

Transcript

HOLI01343.g41314.t1

Protein

Uniprot

Uniprot term	Description
Q4VNC0	Probable cation-transporting ATPase 13A5 OS=Homo sapiens OX=9606 GN=ATP13A5 PE=1 SV=1
Q5ZKB7	Probable cation-transporting ATPase 13A4 OS=Gallus gallus OX=9031 GN=ATP13A4 PE=2 SV=1
Q5XF89	Polyamine-transporting ATPase 13A3 OS=Mus musculus OX=10090 GN=Atp13a3 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13246	Cation_ATPase	Cation transport ATPase (P-type)	Family	Interproscan
PF00122	E1-E2_ATPase	E1-E2 ATPase	Family	Interproscan
PF12409	P5-ATPase	P5-type ATPase cation transporter	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001757	Family	P-type ATPase	Interproscan
IPR023214	Homologous_superfamily	HAD superfamily	Interproscan
IPR023299	Homologous_superfamily	P-type ATPase, cytoplasmic domain N	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR008250	Homologous_superfamily	P-type ATPase, A domain superfamily	Interproscan
IPR018303	PTM	P-type ATPase, phosphorylation site	Interproscan
IPR006544	Family	P-type ATPase, subfamily V	Interproscan
IPR044492	Domain	P-type ATPase, haloacid dehalogenase domain	Interproscan
IPR036412	Homologous_superfamily	HAD-like superfamily	Interproscan
IPR047819	Domain	P5B-type ATPase, N-terminal	Interproscan
IPR023298	Homologous_superfamily	P-type ATPase, transmembrane domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45630	CATION-TRANSPORTING ATPASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005215	Molecular Function	transporter activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0000166	Molecular Function	nucleotide binding	Interproscan
GO:0140358	Molecular Function	P-type transmembrane transporter activity	Interproscan
GO:0006874	Biological Process	intracellular calcium ion homeostasis	Interproscan
GO:0019829	Molecular Function	ATPase-coupled monoatomic cation transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan