Detailed information of HOLI01373.G12534 in Hydra oligactis

Genomic Location: HOLI01373:222313...230470
NR annotation: XP_002170800.1, transforming growth factor-beta receptor-associated protein 1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q3UR70Transforming growth factor-beta receptor-associated protein 1 OS=Mus musculus OX=10090 GN=Tgfbrap1 PE=1 SV=1
Q8WUH2Transforming growth factor-beta receptor-associated protein 1 OS=Homo sapiens OX=9606 GN=TGFBRAP1 PE=1 SV=1
A7MB11Transforming growth factor-beta receptor-associated protein 1 OS=Bos taurus OX=9913 GN=TGFBRAP1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01490Aa_transTransmembrane amino acid transporter proteinFamilyInterproscan
PF10366Vps39_1Vacuolar sorting protein 39 domain 1RepeatInterproscan
PF00637ClathrinRegion in Clathrin and VPSRepeatInterproscan
PF00780CNHCNH domainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013057DomainAmino acid transporter, transmembrane domainInterproscan
IPR019452DomainVacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 1Interproscan
IPR000547RepeatClathrin, heavy chain/VPS, 7-fold repeatInterproscan
IPR001180DomainCitron homology (CNH) domainInterproscan
IPR032914FamilyVam6/VPS39/TRAP1 familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12894CNH DOMAIN CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006914Biological ProcessautophagyInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0034058Biological Processendosomal vesicle fusionInterproscan

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