Detailed information of HOLI01411.G38070 in Hydra oligactis

Genomic Location: HOLI01411:87681...102095
NR annotation: XP_002166379.2, DNA ligase 4 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q90YB1DNA ligase 4 OS=Gallus gallus OX=9031 GN=LIG4 PE=2 SV=2
P49917DNA ligase 4 OS=Homo sapiens OX=9606 GN=LIG4 PE=1 SV=2
Q5R6L3DNA ligase 4 OS=Pongo abelii OX=9601 GN=LIG4 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF11411DNA_ligase_IVDNA ligase IVFamilyInterproscan
PF00533BRCTBRCA1 C Terminus (BRCT) domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR021536DomainDNA ligase IV domainInterproscan
IPR001357DomainBRCT domainInterproscan
IPR036420Homologous_superfamilyBRCT domain superfamilyInterproscan
IPR029710FamilyDNA ligase 4Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45997DNA LIGASE 4Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003910Molecular FunctionDNA ligase (ATP) activityInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005958Cellular ComponentDNA-dependent protein kinase-DNA ligase 4 complexInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006297Biological Processnucleotide-excision repair, DNA gap fillingInterproscan
GO:0006303Biological Processdouble-strand break repair via nonhomologous end joiningInterproscan
GO:0032807Cellular ComponentDNA ligase IV complexInterproscan
GO:0051103Biological ProcessDNA ligation involved in DNA repairInterproscan

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