Gene detail

Detailed information of HOLI01423.G1434 in Hydra oligactis

Genomic Location: HOLI01423:77015...77539
NR annotation: MBW8462353.1, polyribonucleotide nucleotidyltransferase [Acidovorax sp.]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
B9MEL0	Polyribonucleotide nucleotidyltransferase OS=Acidovorax ebreus (strain TPSY) OX=535289 GN=pnp PE=3 SV=1
A1W4L8	Polyribonucleotide nucleotidyltransferase OS=Acidovorax sp. (strain JS42) OX=232721 GN=pnp PE=3 SV=1
A1TLL2	Polyribonucleotide nucleotidyltransferase OS=Paracidovorax citrulli (strain AAC00-1) OX=397945 GN=pnp PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01138	RNase_PH	3' exoribonuclease family, domain 1	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012162	Family	Polyribonucleotide nucleotidyltransferase	Interproscan
IPR027408	Homologous_superfamily	PNPase/RNase PH domain superfamily	Interproscan
IPR001247	Domain	Exoribonuclease, phosphorolytic domain 1	Interproscan
IPR036345	Homologous_superfamily	Exoribonuclease, PH domain 2 superfamily	Interproscan
IPR020568	Homologous_superfamily	Ribosomal protein uS5 domain 2-type superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11252	POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000175	Molecular Function	3'-5'-RNA exonuclease activity	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0004654	Molecular Function	polyribonucleotide nucleotidyltransferase activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006401	Biological Process	RNA catabolic process	Interproscan
GO:0006402	Biological Process	mRNA catabolic process	Interproscan