Detailed information of HOLI01478.G45218 in Hydra oligactis

Genomic Location: HOLI01478:88669...220914
NR annotation: XP_047142510.1, uncharacterized protein LOC100210231 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8JHW2Thrombospondin-3a OS=Danio rerio OX=7955 GN=thbs3a PE=2 SV=2
Q1L8P7Thrombospondin-3b OS=Danio rerio OX=7955 GN=thbs3b PE=3 SV=1
P35443Thrombospondin-4 OS=Homo sapiens OX=9606 GN=THBS4 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13385Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF02412TSP_3Thrombospondin type 3 repeatDomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF05735TSP_CThrombospondin C-terminal regionFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR028974Homologous_superfamilyTSP type-3 repeatInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR003367RepeatThrombospondin, type 3-like repeatInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR008859DomainThrombospondin, C-terminalInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR017897RepeatThrombospondin, type 3 repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10199THROMBOSPONDINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan

TOP