Gene detail

Detailed information of HOLI01493.G56348 in Hydra oligactis

Genomic Location: HOLI01493:154923...206376
NR annotation: CRX73229.1, Sodium/potassium-transporting ATPase subunit alpha-1, partial [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

HOLI01493.g56348.t1

ATGCTTGATCCTCCGAGACCAGCTGTACCTGGTGCTGTTCGTAAATGTAGAAGTGCTGGAATTAGAGTTATCATGGTAACAGGGGATCATCCCACCACTGCTAAAGCTATTGCTAGAAATGTTGGAATCATATCTGAAGGAAATGACACTATTGAAGACGTAGCACAGATGTTGAGTATATCAAATGATGAAGCCAATAAGTATGAAGTAAATGCTTGTGTAGTCATTGGTGTAAGTTGTGTAGTCACTGGTGAATCACTCCATGAATCACTCCATGAACTAGTTGGTTGCGCAATAGTTAACAATGAACTAGTTGGTTGCGCAATAGGTGAAATTGTTTTTGCTCGCACCTCACCACAGCAAAAACTAATCATTGTAGAAGGTTGTCAACGTCTTGGTGCGATTGTAGCTGTTACTGGCAATGGTGTGAACGATTCGCCTGCCTTAAAGAGGGCAGATATTGGAATTGCTATGGGTATTGTTGGATCAGATGTTTCAAAGAAAGCTGCTGATATGATTTTAGTAGATGATAACTTTGCTTCTATTGTTACCGGTATAGAGGAAGGGCGCCTGATATTTGACAATTTAAAGAAATCAATTGTATACACGCTGACTAGTAACATTCCAGAATTAACTCCTTTTATTTATTTTATTATACTAAACATACCTTTGCCACTAGGTACCATACCAATTTTATGCATTGATATTGGTACTGATCTTGTCCCTGCTATCTCATTAGCTTATGAGCCACCTGAAAATGATATTATGGAATGCAAGCCTCGTAACCCTAAGTATGACAAACTTGTGACATCTCGTCTTATTTGTTTGTCATATCCAATAAGAGGGGTTATTCAGTCAGTTGGCGCTTTCTTGTGTTATTGTATTGTTTTTGGTCAAAACGGGTTTTGGCCGTTACATTTAATTGGAATTAGAGTCAAATGGGACGATAAACATGTTAATAATCTTGAAGATTCCTATGGCAGTGAATGGAATTACCACCAACGGAAAGAGTTAGAATTTACAGTTCAGACAGCTTTTTTTACTAGCATTATTGTTGCGCAATGGGGTGATCTTATTGTCAGTAAAACTAGGCGGCTATCGTTATTTCAACATGGGACGAGCAATTGGCTCTTGAACTTTAGTTTAGTTTTTGAAACCGCTCTAACTTGCTTTCTCCAGTATACACCTGGTTTAAATACTGGATTGAGCTTGCGACCAATTAGATTTGTCTACTGGTTTCCTGGTGTTCCCTATGCTTGTTTGATTTTTTTTCTAGACGAACTTAGAAAGTTTATTATACGGAACTATCCAGGAGGTAAAGTTAGAATTTTGATTCTTGTATATACATCTTTCTTTGGAGCTAAACCGTGGCCGTTTTTTACAAATCTTACATGTAATTTTGACACGTCATATTTTAAAATATCACATAATCAAAATGATTTTTATAAAAGTGACGTTGTGATATTTCATGGTCCTAACATGCCATCACTTTTTGAATTAAAGAAAATGCGAAGTAATCGAAAATTTGGACAACTTTGGATATATTTTACTATGGAATCTATACGTAATAATCGACCTGTAAAAGAGTTTAGTATGTTTTTTGATTTAGTCTCAACGTATGCAATAAACTCAGATATTCAAATTCCATACAGGTATCATGCAAGAATAAACGGTTCTACAAATGATGTCTTTAAGATTGATAACTTTTCATATAAAAATAAAATGGTAGCTTGGTTTGTAAGTAACTGCAGGGGACTAGAAAGAAATAAACTTGCTCAAAAACTCCTTTCATACGGAATAGATATTGAGGTCTCAGGAGTATGCTCTAAAGATTTTCCTAAAACATTTAGATCATCGTGTCGAAGAAGACCCTGCAATAAAGATTTGAGGAACTTTAAATTTTACTTTTCAGCTGAAAACAGTTTGTGCGAGGACTACATTACAGAAAAATATTGGGAAACTGCTTTAAACAATAATGTTATTCCTATAGTTTTAGGAGGGTCTAACTATTCTGATCCTAGACTAGCCATTCCTGGATCTTTTATTGATGCAATGAGTTTTGAATCACCAAAAGCTCTTGCTGAGCATATCTTAGATGTGAGCACTAACCAAGCGAAATACAATTCTTATTTCGAGTGGAAAAAAGACTGGAAGCTAGATACTAACTCATACTATTGTTCGCTTTGTCAAAAGTTTAAAGACGGTTTTAAGCTTAAAAAAAAATTTTCTTTTTAA

Transcript

HOLI01493.g56348.t1

Protein

Uniprot

Uniprot term	Description
P35317	Sodium/potassium-transporting ATPase subunit alpha OS=Hydra vulgaris OX=6087 PE=2 SV=1
A2VDL6	Sodium/potassium-transporting ATPase subunit alpha-2 OS=Bos taurus OX=9913 GN=ATP1A2 PE=1 SV=1
D2WKD8	Sodium/potassium-transporting ATPase subunit alpha-2 OS=Sus scrofa OX=9823 GN=ATP1A2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00689	Cation_ATPase_C	Cation transporting ATPase, C-terminus	Family	Interproscan
PF00852	Glyco_transf_10	Glycosyltransferase family 10 (fucosyltransferase) C-term	Family	Interproscan
PF17039	Glyco_tran_10_N	Fucosyltransferase, N-terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006068	Domain	Cation-transporting P-type ATPase, C-terminal	Interproscan
IPR001503	Family	Glycosyl transferase family 10	Interproscan
IPR038577	Homologous_superfamily	GT10-like, C-terminal domain superfamily	Interproscan
IPR023214	Homologous_superfamily	HAD superfamily	Interproscan
IPR031481	Domain	Fucosyltransferase, N-terminal	Interproscan
IPR036412	Homologous_superfamily	HAD-like superfamily	Interproscan
IPR050510	Family	Cation transport ATPase (P-type)	Interproscan
IPR001757	Family	P-type ATPase	Interproscan
IPR023298	Homologous_superfamily	P-type ATPase, transmembrane domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43294	SODIUM/POTASSIUM-TRANSPORTING ATPASE SUBUNIT ALPHA	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006486	Biological Process	protein glycosylation	Interproscan
GO:0008417	Molecular Function	fucosyltransferase activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0005391	Molecular Function	P-type sodium:potassium-exchanging transporter activity	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0006883	Biological Process	intracellular sodium ion homeostasis	Interproscan
GO:0019829	Molecular Function	ATPase-coupled monoatomic cation transmembrane transporter activity	Interproscan
GO:0030007	Biological Process	intracellular potassium ion homeostasis	Interproscan
GO:0036376	Biological Process	sodium ion export across plasma membrane	Interproscan
GO:1902600	Biological Process	proton transmembrane transport	Interproscan
GO:1990573	Biological Process	potassium ion import across plasma membrane	Interproscan
GO:0005215	Molecular Function	transporter activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan