Detailed information of HOLI01529.G35427 in Hydra oligactis

Genomic Location: HOLI01529:172853...173578
NR annotation: MBI3887866.1, polyribonucleotide nucleotidyltransferase [Candidatus Microgenomates bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A4XL64Polyribonucleotide nucleotidyltransferase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903 / Tp8T 6331) OX=351627 GN=pnp PE=3 SV=1
B9MR54Polyribonucleotide nucleotidyltransferase OS=Caldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / KCTC 15123 / Z-1320) OX=521460 GN=pnp PE=3 SV=1
A5URV5Polyribonucleotide nucleotidyltransferase OS=Roseiflexus sp. (strain RS-1) OX=357808 GN=pnp PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03725RNase_PH_C3' exoribonuclease family, domain 2DomainInterproscan
PF01138RNase_PH3' exoribonuclease family, domain 1DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015847DomainExoribonuclease, phosphorolytic domain 2Interproscan
IPR001247DomainExoribonuclease, phosphorolytic domain 1Interproscan
IPR036345Homologous_superfamilyExoribonuclease, PH domain 2 superfamilyInterproscan
IPR020568Homologous_superfamilyRibosomal protein uS5 domain 2-type superfamilyInterproscan
IPR027408Homologous_superfamilyPNPase/RNase PH domain superfamilyInterproscan
IPR012162FamilyPolyribonucleotide nucleotidyltransferaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11252POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000175Molecular Function3'-5'-RNA exonuclease activityInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004654Molecular Functionpolyribonucleotide nucleotidyltransferase activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006401Biological ProcessRNA catabolic processInterproscan
GO:0006402Biological ProcessmRNA catabolic processInterproscan

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