Genomic Location: HOLI01590:145285...175338
NR annotation: XP_047124859.1, uncharacterized protein LOC100197241 isoform X2 [Hydra vulgaris]
| CDS | |||||
| HOLI01590.g8892.t1 | |||||
| Transcript |
| HOLI01590.g8892.t1 |
| Protein |
| HOLI01590.G8892 |
| Uniprot term | Description |
|---|---|
| A6H584 | Collagen alpha-5(VI) chain OS=Mus musculus OX=10090 GN=Col6a5 PE=1 SV=4 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00092 | VWA | von Willebrand factor type A domain | Domain | Interproscan |
| PF02469 | Fasciclin | Fasciclin domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR036465 | Homologous_superfamily | von Willebrand factor A-like domain superfamily | Interproscan |
| IPR036378 | Homologous_superfamily | FAS1 domain superfamily | Interproscan |
| IPR002035 | Domain | von Willebrand factor, type A | Interproscan |
| IPR000782 | Domain | FAS1 domain | Interproscan |
| IPR050525 | Family | Extracellular Matrix Assembly and Organization | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24020 | COLLAGEN ALPHA | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| - | - | - | - |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K06238 | COL6A; collagen type VI alpha | - | Glycosaminoglycan binding proteins | ko00536 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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