Detailed information of HOLI01623.G26799 in Hydra oligactis

Genomic Location: HOLI01623:172044...199041
NR annotation: XP_002160793.3, uncharacterized protein LOC100214037 isoform X1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5JVF3PCI domain-containing protein 2 OS=Homo sapiens OX=9606 GN=PCID2 PE=1 SV=2
Q8BFV2PCI domain-containing protein 2 OS=Mus musculus OX=10090 GN=Pcid2 PE=1 SV=1
Q5FWP8PCI domain-containing protein 2 OS=Xenopus laevis OX=8355 GN=pcid2 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF01399PCIPCI domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR045114FamilyCsn12 familyInterproscan
IPR000717DomainProteasome component (PCI) domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12732UNCHARACTERIZED PROTEASOME COMPONENT REGION PCI-CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000973Biological Processpost-transcriptional tethering of RNA polymerase II gene DNA at nuclear peripheryInterproscan
GO:0003690Molecular Functiondouble-stranded DNA bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0006368Biological Processtranscription elongation by RNA polymerase IIInterproscan
GO:0016973Biological Processpoly(A)+ mRNA export from nucleusInterproscan
GO:0070390Cellular Componenttranscription export complex 2Interproscan

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