Gene detail

Detailed information of HOLI01968.G24466 in Hydra oligactis

Genomic Location: HOLI01968:23204...93381
NR annotation: XP_012560853.2, aarF domain-containing protein kinase 1 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

HOLI01968.g24466.t1

ATGGCCGCCGATATGATTAGTGAGTTACAGCAAGCTCGTGATGCATTAAAACAAAACATAATTGCTGTTGATGAAACAATAAAGAAACTAACAGGTCGTGATCCTGCAGAACATGTTAGATCCACAGGAAGAAGAATACAACTAAAGAGAAACTCATATGGTGACAAATTTGGCAACCATCAACCGCCTGCTAAGTTAGCAAATACTGAACGAAGGAGGTGGGGAACAACCCTTAACCGTGAAAAGCGATTGGACAGCGGTGGAGAGGAAGAAGAAGAAAAAAAAGTTGCCTTTGTTTCCAGACCCGCTGTTCATTCATCGGTTGTGGTTACCGGTAAGCCTGTGTTACAGTCATCGGTTGAAGAAGATGTTACCACTAAAAATAGGAACCGTCGTATGTTTGGATTATTAGTTGGAACATTGAAACAGTTCAAGCGTGAAAGTCAGGTTAAAACAGAACAGGACTCAAAGCGTGAGGAGAAGTTAAGCAAAGTGGAAGATCAGGTTCAGAAAGAAAAAGACAACGCACTTATAGAAAGAAAAGAATTGTATCAATCAAGAAGGAGTAAACAACTAGAGCTAAAGCAGCTAGAATTCAAATTGGAAATGGCAAAATTAAATGTAGAACTAAAAGACCATTATTCAAGTTCAAAGATTTTACAAGAATCACAAAAATTTTTGAATGAATCATTAGAGCAGCGTCTTAAAGAGATTGATATGTTCACAGAAGCTGATTTTTTACCTCCTACTCGCAAAACTCTCGGTAAAACTAGTAAAGATCCAATTGTCATTTCAGACGCTAAGCCTGCCAATCAAAGAGATTTGTTTGCAGAAGACGCTGATAATGAAGAAAGAGAAAAGGATGTTGTTGACTTGAAGGACGTAGATGACATATTAGAAATAATTGATAAAAATCAGGTTTGCGATATTGATGTTATCAAATGTGACACCTTTGATGTTGATGTTGTAAAATCTGGAACCTTTGATGTTGTTGACGAACGAATTGTTGAACTAGCTGATCATTCAGAGGAGTCAAGAGATCAGTTCAAAAACAATGAAATGACAAAGAGTTTGTGTAAAAGAACACTACAATCTGCTGTACTTACATTTGCGGTAGTAGCTCATGTGAAAAACGACGATGGAATGTTGAATCAATTCAAATTTTGGATTTGCAATGAGTACACTCAAAAAATTACTCACAGTAGTTTGATGAGATTTGGAAGAGCAACTTATACAGTAATTTCAGTTGTGTTTGATTATAAATACTCGCTTGTAGGAATCGATTACCAGTCAACTCGGTACTTTGAAAAAAAATCAGAGTGTCATCTACGATCGGCTAAAAAATTTCAAGAATTATGTTCAATAAATGGTGGGTTATTTATGAAAATTGGTCAACACATTGGCTCTTTAGATTTTCTCTTTCCTAAAGAATACACTGAAACTTTGAAATGTTTTCAGTACCAAGCACCTGCTAGTAGCATTGATGATGTTAGATATGTAATTGAGTCTGAAACAAACCAAAAAATTGAAGAGTTGTTCAGTGAGTTTAATCCAGAACCTATTGGGTCAGCATCCTTAGCTCAAGTGCATCAAGCTATTCTTAAAGATGGAACTTCTGTTGCAGTTAAAGTTCAACATCGCACAGTAAAAAAGTATGCTTTAGCAGATGCAAAATTTATTGAGTTTTGTGTTGGAGTAGCATCTAGCCTTTTTCCAGAATTTCGGTTTCAGTGGCTTGTTGATCAGATTAAAGAAAGTATACCACTAGAAACAGATTTTCTTCATGAAGGAAGAAACTGTGAAAAATTAGCTAATATGTTAAAGGATGTTTCTTTTTTGAAGGTTCCCAAGATATACTGGAAAAACTCAACAGAAAGAGTGTTGCTGATGGAGTTTTGTCAAGGGGGAGTGATTGATGATTTGGATTTCATAAAGAAAAATAACATTAATCAAAATGATATATCTTCAAAGCTTGGTCGACTATACAGTGAAATGATATTTGTTCAAGGCTTTATACATTGCGATCCTCACCCTGGAAACATACTAGTGCGTTTAAATGCCTCTGGTTCAACTGAAATCATTTTGCTTGATCACGGTTTGTATCAGACACTTCCCAACAAAACTCGATTAACATATTGTGATCTCTGGCAGAGTTTAATAAATTCAGATATTGATGGAATTAAGAAATCTAGTGAAATATTGGGTGTGGGAGAGTATTACGGTTTATTTGCCTGTATGGTGTCTGGAAGATCTTGGCAGTCGATTCAAGACGGTATTGAGCGTAAATCGATTACTGGAGATGAGTTAAATGAAATCCAGAGCACTGCTGTACAATTAGTATCGACGATTACAGAAGTCTTGGAGAAATTGCCTCGTGAAATGGTGCTTATATTTAAGACAAATGACCTTTTACGCGGCCTTGATGCCCGCTTAGACATTAGCCCCAGAATCAAACAGCAACTTATAAAAGCTAGAATAACTGAAGTTTCAAGTCTATTTTCTTTAACTATTTATGAGCTGGATGGAAAAGTTTCATTAAAGGAATCAAACCTAAAAGAGTTGCTAAATGTTGCGGCAAAATATCTTTTAAAATCATCCATAAAAACTGCGTACAGTTTACACACAAATGAAGAATATAAGCATCACAAAATATCCACGGGATGTGCATTAATCGATCAGTGTCTTCAGGGAGGAATAATATATCCTGGTGTTACTGAAATATGTGGTGAAAGTGCGAGTGGAAAGACACAGCTTTGTATACAAATTTGTCTAAAAGCTATAATATCAGATAGTTACTCAAGTGTTTTGTACATATGTACAGAAGATGCTTTTCCAATGAAGCGCTTACAACAGATGTCAGAGATCATTGTTGAAAAGATTCCTTGTGCTACTTCAACAAATCTGACTGATCGCATATTCATTGAGCATACTGCTGAGCTATTAAGTTGA

Transcript

HOLI01968.g24466.t1

Protein

Uniprot

Uniprot term	Description
Q9D0L4	AarF domain-containing protein kinase 1 OS=Mus musculus OX=10090 GN=Adck1 PE=1 SV=1
Q86TW2	AarF domain-containing protein kinase 1 OS=Homo sapiens OX=9606 GN=ADCK1 PE=1 SV=2
Q5ZMT7	AarF domain-containing protein kinase 1 OS=Gallus gallus OX=9031 GN=ADCK1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03109	ABC1	ABC1 atypical kinase-like domain	Domain	Interproscan
PF04697	Pinin_SDK_N	pinin/SDK conserved region	Family	Interproscan
PF04696	Pinin_SDK_memA	pinin/SDK/memA/ protein conserved region	Family	Interproscan
PF08423	Rad51	Rad51	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR020588	Domain	DNA recombination and repair protein RecA-like, ATP-binding domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR004147	Domain	ABC1 atypical kinase-like domain	Interproscan
IPR045307	Domain	ADCK1-like domain	Interproscan
IPR006787	Domain	Pinin/SDK	Interproscan
IPR051130	Family	Mitochondrial structure and function regulator	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR006786	Domain	Pinin/SDK/MemA protein	Interproscan
IPR013632	Domain	DNA recombination and repair protein Rad51-like, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43173	ABC1 FAMILY PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006281	Biological Process	DNA repair	Interproscan
GO:0140664	Molecular Function	ATP-dependent DNA damage sensor activity	Interproscan
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan