Gene detail

Detailed information of HOLI02098.G41694 in Hydra oligactis

Genomic Location: HOLI02098:103660...140547
NR annotation: XP_047142985.1, uncharacterized protein LOC100215622 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

HOLI02098.g41694.t1

ATGGATGACAAGAAAATTTCAAGACCAAGAACCATCCAAAATTTCTTTTCAATATTTACGTATTTCCATTTCACCACTCTATTGCACTATTCAGTTTTAAGAGACATACAAACAGTTTCTAGTAATATTGGTTGTGCTTTTGGTTGGTTAGAACATGGAAGCCATTGCTACTTTTTTGGAACTGAAAATAAAACTTGGATAGATTCACTTTCTTTTTGTGAGAATCAAGGAGCAAACTTGTTAAGTTTAGAAGATCATGAAGAAAGTTTATTTGTTGTCAAAAACACACATGACCATTATTATTGGATTGGTCTTAATGATATTCAGGTAGAGGGAAAATTTACTTGGTCTGATAATACAATTTCACCGTTTGTTAATTGGAAATTAACTAGCAATGAACCTAATGGAAATATAGAGGAAAACTGTGTCCTAATAGACTCAAATGGTCTATGGAATGACTATTCTTGCAATACAAATTTAATGTCAATTTGTAAACTTAAAAAAGGGTCACACCGAAAAATTCCAGTAAACTTAAAAGAAGTCATGATGGCAAAAAAAGACAGAAAGAAGAAAAAGCCCAATAGAAAAGCAAAGAATAGAAATATTTATCACAGCAATAACACTTTTTATGGTTATCACAAAAACAATGCAGATGTTTCTATCACCGAAAAAAATATAATTCAGTTTAGAAAGTTTTGTGGATATGAACCAGTTACAGAAATGTTAAATACGCCAACAAATAACCTATTTCAAAATTTACTTTATGGAAGAAAGAAAATTTTAGATCACAAAAGGATTAAGAGATTTTTAAAACACAAACAGAAGACTGGAAACAAATGGAAGACTGCGAGAGATAAAATAGCCAAGCGGAATAATAAAAAATTTACCTGGAGACTTTTAAACAATAACAAAAAATGCACATTTGATAACAAATCAGAAGATACGCTGGAAAAAGCTTTTACTCTCTGGAGTCAAATCTATTCAGGTTTAAATTTTGAAAAACTTAATTGTACTTCAAGTCGTCAAGCAGACATAGAGATAAAATTTGTTAATAGTAGCTATGGTTCATTTAAACAAATGAAGAAGTATGCACGCACATTGAATTCTCTGAATGGAAAATTTTCAGTTATTTATTTTAACAATGGGTATGATTTCATTGAAAATTTACTGTTGCGTGTTGCTGTTCACGAAATTGGACACGTTTTAGGGTTGCCTGACACAGATATCCAGGATGCAGTAATGAATAGGGCATTTGTTGAAGGAAATACTACCAAGTTTAGCGAAGATGATATCTCGAAAATAAAGTCTTTATATGATCGTTCTTATAATGAGTGTGACGAAGTTTATCAAAATAAAAGTGATTGTATAGTTGCTGATCATTACTACTGCACACAAGATTCCGATTGTCAACCCAATGGAAAATGTTGCTATGATGGATGTAATTACGGTTGTACAAATCAAATAGCTTATGTTCGTGAACTTCCAAAAGCAGGCAAACATCATTTAAAATTATCATTTAAAATTATCATTGCTGCAATATCAGTTCCTGTCCTTATCGCTATTATTTTTGTTGTTGTTGTATTCTTCAAAAGAAAACGTTTGAAAAAATATAAATCTTATAGATTATTGTGGGCATACAAGAAAAAAAATTGTCTTGAGGAATTATTATCAGATAGTTGGGAGATTTTTCCTGAAAATATTGAGTTTGGCAAATCAATTGGTAAGGGAGCGTTTGGTACTGTCTACATCGGAAAAATCAACTCTTTGGTTTTTGCTAAAAAAAATAATCCTAACATAAGATTTCTTGATTTCAAAAATGATTCAACTTCGAATGTTGCAGTGAAAGTTTTAAAAGATAGTGAAGTTGAATCTAAATTTAATGATCTTCGTGAAGAAATTAATTTGATGAAAGGAATTGGATACCATGAGAATATTGTTAACATGATTGGTTACTCCACATTTAAGAAACCTTATTATATAATTGTTGAATTTATGGAGAATGGAGATTTGTTGCATTTTTTGAGAAAAAGACGCTCCAAACTATTTGCATCAAAAGATCATGGAAATTTAACTGCAAATTTTATGTACAACCAAAGCTTCAAAAAATCCCTTGAGACAATCAATGAGATTTGTAGGATCGAATCGCTATCATATGGTAATGCACTACCTGATATTGGATGGATAACACCAGATGATCTCCTTAGTTTTGCATGGCAAGTTGCATCAGGAATGGAATATCTTTCAAGCAAAAAACTGATACACCGAGACCTGGCTGCGAGAAATATTTTGGTAGGTGGTAACAAAAATGTTAAAATATCTGATTTTGGTTTGACACGGAAAGTCAACAATGGATCAATCTATTCCACAGATAAAAAAATTCGTTTGCCAATCAAATGGATGTCAATTGAAGCGATAAATGAGCGTATATTCTCAACATCTAGTGATGTCTGGGCGTATGGTGTTGTTTTGTTTGAAATTGTTACGTTAGGAGGGACACCTTACCCAACAATAAATAACTCTGAACTCTTTGATCGTTTAAATTCTGGTTACAGAATGGAAAGGCCAGCAAATTGTTCACAACCTATGTATGATATCATGCTGCAATGTTGGAATAAAGATCGTTTGCAGCGACCTACCTTTACTGCATTACGAGAACGTTTCGATAAAATATTATCTCAAGCAATTCCGTATTTTAGCTTTGATATTGATGAAAAAAATGTATTTTATACTGCCGCCTCCTTTAAAAGTGTTGAAACAAATAATGATGCTTAA

Transcript

HOLI02098.g41694.t1

Protein

Uniprot

Uniprot term	Description
Q26614	Fibroblast growth factor receptor OS=Strongylocentrotus purpuratus OX=7668 GN=FGFR PE=2 SV=1
Q9I8X3	Fibroblast growth factor receptor 3 OS=Danio rerio OX=7955 GN=fgfr3 PE=2 SV=1
Q91287	Fibroblast growth factor receptor 3 OS=Pleurodeles waltl OX=8319 GN=FGFR3 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07714	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan
PF00059	Lectin_C	Lectin C-type domain	Domain	Interproscan
PF00413	Peptidase_M10	Matrixin	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016187	Homologous_superfamily	C-type lectin fold	Interproscan
IPR001245	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR018378	Conserved_site	C-type lectin, conserved site	Interproscan
IPR008266	Active_site	Tyrosine-protein kinase, active site	Interproscan
IPR006026	Domain	Peptidase, metallopeptidase	Interproscan
IPR050122	Family	Receptor Tyrosine Kinase	Interproscan
IPR024079	Homologous_superfamily	Metallopeptidase, catalytic domain superfamily	Interproscan
IPR001304	Domain	C-type lectin-like	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR020635	Domain	Tyrosine-protein kinase, catalytic domain	Interproscan
IPR016186	Homologous_superfamily	C-type lectin-like/link domain superfamily	Interproscan
IPR001818	Domain	Peptidase M10, metallopeptidase	Interproscan
IPR021190	Family	Peptidase M10A	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24416	TYROSINE-PROTEIN KINASE RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0008237	Molecular Function	metallopeptidase activity	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0004714	Molecular Function	transmembrane receptor protein tyrosine kinase activity	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0007169	Biological Process	cell surface receptor protein tyrosine kinase signaling pathway	Interproscan
GO:0007275	Biological Process	multicellular organism development	Interproscan
GO:0033674	Biological Process	positive regulation of kinase activity	Interproscan
GO:0043235	Cellular Component	receptor complex	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0004713	Molecular Function	protein tyrosine kinase activity	Interproscan
GO:0004222	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0031012	Cellular Component	extracellular matrix	Interproscan