Detailed information of HOLI02100.G44091 in Hydra oligactis

Genomic Location: HOLI02100:9880...44109
NR annotation: VBB17984.1, DEAD/SNF2-like helicase [Yasminevirus sp. GU-2018]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P54358DNA polymerase delta catalytic subunit OS=Drosophila melanogaster OX=7227 GN=PolD1 PE=1 SV=2
P97283DNA polymerase delta catalytic subunit OS=Mesocricetus auratus OX=10036 GN=POLD1 PE=2 SV=1
P52431DNA polymerase delta catalytic subunit OS=Mus musculus OX=10090 GN=Pold1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00136DNA_pol_BDNA polymerase family BFamilyInterproscan
PF00176SNF2-rel_domSNF2-related domainDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006172FamilyDNA-directed DNA polymerase, family BInterproscan
IPR042087Homologous_superfamilyDNA polymerase family B, thumb domainInterproscan
IPR038718Homologous_superfamilySNF2-like, N-terminal domain superfamilyInterproscan
IPR006134DomainDNA-directed DNA polymerase, family B, multifunctional domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000330DomainSNF2, N-terminalInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR023211Homologous_superfamilyDNA polymerase, palm domain superfamilyInterproscan
IPR050240FamilyDNA polymerase type-BInterproscan
IPR017964Conserved_siteDNA-directed DNA polymerase, family B, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10322DNA POLYMERASE CATALYTIC SUBUNITInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003887Molecular FunctionDNA-directed DNA polymerase activityInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0140658Molecular FunctionATP-dependent chromatin remodeler activityInterproscan
GO:0006261Biological ProcessDNA-templated DNA replicationInterproscan
GO:0006287Biological Processbase-excision repair, gap-fillingInterproscan
GO:0006297Biological Processnucleotide-excision repair, DNA gap fillingInterproscan
GO:0008296Molecular Function3'-5'-DNA exonuclease activityInterproscan
GO:0043625Cellular Componentdelta DNA polymerase complexInterproscan
GO:0045004Biological ProcessDNA replication proofreadingInterproscan

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