Detailed information of HOLI02137.G15397 in Hydra oligactis

Genomic Location: HOLI02137:67983...70319
NR annotation: WP_242421967.1, GGDEF domain-containing phosphodiesterase, partial [Acidovorax sp. GW101-3H11]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P55552Uncharacterized protein y4lL OS=Sinorhizobium fredii (strain NBRC 101917 / NGR234) OX=394 GN=NGR_a02630 PE=4 SV=1
Q9I310Bifunctional diguanylate cyclase/cyclic di-GMP phosphodiesterase MucR OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=mucR PE=1 SV=1
Q9ABX9Uncharacterized signaling protein CC_0091 OS=Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15) OX=190650 GN=CC_0091 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08447PAS_3PAS foldDomainInterproscan
PF13188PAS_8PAS domainDomainInterproscan
PF00990GGDEFDiguanylate cyclase, GGDEF domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000014DomainPAS domainInterproscan
IPR000700DomainPAS-associated, C-terminalInterproscan
IPR052155FamilyBacterial biofilm regulation signaling proteinInterproscan
IPR000160DomainGGDEF domainInterproscan
IPR035919Homologous_superfamilyEAL domain superfamilyInterproscan
IPR029787Homologous_superfamilyNucleotide cyclaseInterproscan
IPR001610RepeatPAC motifInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR013655DomainPAS fold-3Interproscan
IPR001633DomainEAL domainInterproscan
IPR035965Homologous_superfamilyPAS domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44757DIGUANYLATE CYCLASE DGCPInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan

TOP