Gene detail

Detailed information of HOLI02212.G60112 in Hydra oligactis

Genomic Location: HOLI02212:139544...155353
NR annotation: XP_012563473.1, unnamed protein product [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

HOLI02212.g60112.t1

ATGGATTATAATGTGAGATTATTTAATCTTGAAAGTTCGAAAGATATAGAGGAATTTCAAAAAAATCTCTTAGATGAAGAAGAAGAGGTCGAAGAATTTGAAGATGAAGATGTTACAGATGCAGAAGACACCATAGAGTTTCGTCAAGACGATTCACATACAGAAGAAGAACTTGAAAATATTGACTTTAATGAGACAGATAATAACAACAATTATTATGTTGGAAAAGACACTAACTGTAAATGGAATAAGAATCCATTGTCTAGCCGGGAAGCTTGTTTGAAAGGAAATATGATCTCAATATGTCTTGAGCAACTCACTGATCCTCACCCGCTTCTTCGCCAGTGGTTGGCTTTATGTTTAGGTTTAATATGGAAAAATTGTGATGCCGCTCGCTGGTGTGGAATAAGAGATAGTGCTCCAGATAAAATCTCGAAACTTTTAGCAGACCCTCTTCCAGATGTTCGGGCAGCAGCTGTATTTGCACTAGGAACACTAATAGGAAATACAGGTGATCGATCAGATCATGCTAATATGATAGACCAAAGTGTTGCAACAACTCTTACAACAATGCTGGCAAATGAAGGAAGCCCTCTTGTTAGAAAGGAGTTAGTTGTTGCGCTTTATAGTCACATTATGCAGTTTGAAAATGCATTTATTGGTGTTGCTGTCCAGTTTATGGATGATAGTCATTTACATGACTCCTCTGGAGCAGGTACCAATCTTGGTGCCAGCGAATCAAATATTTTGAAGAAAAGTTCTGTTCAAACTTTACCTCCTTCAAGTCGGTCATCAAACAGTCTTAGCAGTATGTATGGTAGTGTTAGTCCAACTGATGATACTCTTTGGTTTCGATCACAAATCTTCTCCTCTTCGCTCCATGAAACTGTTTACACCAGAGTCTGGAAGGCAATGTTCAATCTTTCTATGGACCCACATACTGAAACAGCTGATATGGCTAGAAAAGTTGTGAACACTATTGCAGTCAAGGCTGCTGTTAACATAAAGCCTCGTAATGGATCTTCTTCAGTTTCTGCAAATATATCACTCCCTTCTTCACCCAACACATCAGATGAAGGAGCTTCTATGCCTCAGAGACATTCAGTGGGAGATTTTCATCGCTCAACTTCATTTCCTTCTACACCTGAACAATTTTTCAAAAAGCAAGGAGGCGTACAATCTCCTTTGTATAGGCCACATTCTGTTCAATTTTCTACAAAGCGAGGAATATTTGACAAAGGTCCTGATGTATTTCCAACAAGTGATGATGACTCTGATGGCGATGAAGATGGAATTTCTATGAATAAACATATTCTTGTTCGAACAAAGTTTTATGATTGGTGCTGCGGTTATTTTGCACATTCATTGATGAAGCCTAGTGACGATGTAGATCCTAATAGCACTCAATGTCTTGAAAGAGAAGGACGATTCTTAAGAAACACAAAAGTGCGTAAAATGTCAGCAAAGTTGCTTAAAGATTATCCTATAACTTCTATGGACGATGAAATATTTGTTACCAAAAATCCTAATCCCCCCAGTGTCCTTAAATTCCACCCTTACCATCCGCACCTTGTTGTGGCAGATAGAAGTGGTGTCTCAGTATTAAATTATGAATCAGGTCTTCGCCTTAATCAATTTGATAATGGAAATCCAAGAACATCAAGAATCTGTTCCATGGACATTTTAAACGCTCATGATGTGCCTTTGCTACTTACAGGATCAGATGATGGAGCTGTACGAGTTTGGAGGAATTACGTTGCTGATTCGGATGAAAAACTAAGTTTAGTTACTGCTTGGACTGCGTTATCGGGCATGATTCCATCTCTTAGAGGATCAGGTTCTGGTCTTGTGACTGATTGGGAGCAACAGTCTGGTATGCTATTAGCATCTGGTGATGTACGGATCATTCGGATATGGGATGTTCACAGAGAATTGAAGCTGCAAGACATTCCTACTGGTGCTGATAGTTGTGTCACAAGCCTTGCATGTGATTCATTAAGACAATCACTACTTGTTGCAGGTTTAGGTGATGGTTCAGTGCGAATATATGATCGCAGACAGCCTTCTAATGACTGTCGTGTGATGACACTGCGAGAACACCAAGGTTGGGTTGTGAAAGTTTTGATACAGAAACGAGGTGATGGTAATATTATCAGTGGAAGGTTTGTAAATTTAATTTGA

Transcript

HOLI02212.g60112.t1

Protein

Uniprot

Uniprot term	Description
Q8K4Q0	Regulatory-associated protein of mTOR OS=Mus musculus OX=10090 GN=Rptor PE=1 SV=1
Q8N122	Regulatory-associated protein of mTOR OS=Homo sapiens OX=9606 GN=RPTOR PE=1 SV=1
P87141	Target of rapamycin complex 1 subunit mip1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mip1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011989	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR001680	Repeat	WD40 repeat	Interproscan
IPR004083	Family	Regulatory associated protein of TOR	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12848	REGULATORY-ASSOCIATED PROTEIN OF MTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0009267	Biological Process	cellular response to starvation	Interproscan
GO:0010506	Biological Process	regulation of autophagy	Interproscan
GO:0030307	Biological Process	positive regulation of cell growth	Interproscan
GO:0030674	Molecular Function	protein-macromolecule adaptor activity	Interproscan
GO:0031929	Biological Process	TOR signaling	Interproscan
GO:0031931	Cellular Component	TORC1 complex	Interproscan
GO:0038202	Biological Process	TORC1 signaling	Interproscan
GO:0071230	Biological Process	cellular response to amino acid stimulus	Interproscan
GO:0071902	Biological Process	positive regulation of protein serine/threonine kinase activity	Interproscan