Gene detail

Detailed information of HOLI02626.G39749 in Hydra oligactis

Genomic Location: HOLI02626:15982...55120
NR annotation: XP_047146464.1, lysine-specific demethylase 7B isoform X1 [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P0CH95	Histone lysine demethylase PHF8 OS=Danio rerio OX=7955 GN=phf8 PE=1 SV=1
Q5RHD1	Lysine-specific demethylase 7A OS=Danio rerio OX=7955 GN=kdm7a PE=2 SV=2
P0CF52	Lysine-specific demethylase 7B OS=Danio rerio OX=7955 GN=jhdm1db PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02373	JmjC	JmjC domain, hydroxylase	Domain	Interproscan
PF00628	PHD	PHD-finger	Domain	Interproscan
PF17811	JHD	Jumonji helical domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003347	Domain	JmjC domain	Interproscan
IPR019786	Conserved_site	Zinc finger, PHD-type, conserved site	Interproscan
IPR019787	Domain	Zinc finger, PHD-finger	Interproscan
IPR011011	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan
IPR041070	Domain	Jumonji, helical domain	Interproscan
IPR050690	Family	JHDM1 Histone Demethylase	Interproscan
IPR001965	Domain	Zinc finger, PHD-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23123	PHD/F-BOX CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003712	Molecular Function	transcription coregulator activity	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0006482	Biological Process	protein demethylation	Interproscan
GO:0032452	Molecular Function	histone demethylase activity	Interproscan