Gene detail

Detailed information of HOLI02912.G43879 in Hydra oligactis

Genomic Location: HOLI02912:80149...80957
NR annotation: XP_002160561.1, poly(A)-specific ribonuclease PARN [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q90ZA1	Poly(A)-specific ribonuclease PARN OS=Xenopus laevis OX=8355 GN=parn PE=1 SV=1
P69341	Poly(A)-specific ribonuclease PARN OS=Bos taurus OX=9913 GN=PARN PE=1 SV=2
Q5RC51	Poly(A)-specific ribonuclease PARN OS=Pongo abelii OX=9601 GN=PARN PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04857	CAF1	CAF1 family ribonuclease	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR051181	Family	CAF1 family poly(A)-specific ribonucleases	Interproscan
IPR036867	Homologous_superfamily	R3H domain superfamily	Interproscan
IPR006941	Family	Ribonuclease CAF1	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15092	POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000175	Molecular Function	3'-5'-RNA exonuclease activity	Interproscan
GO:0000289	Biological Process	nuclear-transcribed mRNA poly(A) tail shortening	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0004535	Molecular Function	poly(A)-specific ribonuclease activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan