Gene detail

Detailed information of HOLI02923.G30211 in Hydra oligactis

Genomic Location: HOLI02923:1995...42812
NR annotation: CRX73235.1, Peripheral plasma membrane protein CASK [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

HOLI02923.g30211.t1

ATGCTTCCTTCTTATTTAAGACTTGAAAATGAAATATCCAGAGGCAGTTTTTATACAACTCAACGATGTATAAACACATTAACAGGAGAAGAATATGCTGTAAAGGTTTTTAATTTAAAACCTTCAATTTGCTCAATAACAGATATTAAAAGAGAAGTATCTATATGCAAGCAATTATGTCATCCAAACATTGTTCAAGTAATTAATAGTTATCAAACTACAGAGCATTTCTACATAATATCCGAGTTGATAACAGGATTAGACATATGCAATGAAATTGTGGACAAGGTTGATAATGGTTATTTATACAGTGAAGCTGTTGCAAGCTTTTATATGCACCAGATTTTAGAAGGTCTAGAATTTCTTCATGAATGTCAAGTGGCTCACAGAAACCTAAATCCTCGATGCATGATACTTGCGTCAACAAATAATAATGCACCTGTTAAGATAACTGACTTTGAATTTGCATTAAAAATGCCAGAAAAAAACATTTACACAGAAACAAAACAAGTGGAAATATCTGAGTTTACAGCACCAGAGGTTGCTTATGGAAAAGATTGTAGTTATGCTGTTGATATATGGGGATTTGGTGTTACTTTATATATTTTACTTAATGGTGAAAATCTGCTAAATAATGGTGAAAATCTGCTAAATAATGGTGAAAATCTGCTAAATAGCTTTCCAACAAAAACTAGTCAGAGTTTGCAGTTGTCTGGTTCAGATATTTCGGATGCAGCAAAAGATGTACTATATCTAGTACTAGATTACGATCCTGTAAAGAGACCATCTGCCACATTACTTCTTCAACATGAATGGTTTAATAACAAGCAACAAATACCACATCTTCACTTAATAAAGACTGTAGAGCAACTTAAAAAATTCAATAAAAGACAACAGTATAATTGCCGACTAAGCTACACCAGTGGGGAGTCAACTATTCCAAGTCGACCAATATCAGAAGAAAGTAACAAGTCAGAATCCTTAGTAGATGAATACACACTAGATGCCATGCTAAAGTTGATAGCTAATGCATCTTTATTGAGATCTGAGGTTTGTTTGTTACTTTCGTTGATTTCTTGTAAAGAAACAGTTGTCAGTGAAAAAGTGACTATCTTGTTGGATCTTTTAGATAGCGTTCATTTTAAGACTTTGATGAAAGTGCATGATGAGACGATAAGAGAATTGCAAGAGTTAGATCAACCAATAAAAAATGGATTGAGAGATGGATTGGGTCAAAGTTTTACTGATAATCTTACACGAGTACGATTAATTCAATTTCAGCGGCGTCACTCAGAACCATTGGGCATTACAGTGAAAATGAATAACAAAGAGCACTGCGTGGCTCGAATAATACACGGTGGACTTATACACAGACACGGGACTCTAAATATAGGAGATGAGATTAAAGAAGTGAATGGCACAAATCTGAGTAGGAAATCAGTTGAGATGGTGCAACAGATTTTGAACAATGCTATTGGTGATGTGTCAATGAAAGTTGTTCCAAGTATAAGAAAAGAAGACATTAGCCAGAATGAGCTGTACGTTAGATGTCTATTTGATTATAATCCTACTTTTGATAATTTAATACCTTGTCAGCAAGCTGGAATGTCATTTGAATATGGAGAAATCTTGGAAATAAAGTGTAAATCAGACCCGCTTTGGTGGCAGGCAAAGAAACCCGGAAAACATATGGCAGGTCTAATACCATCACAAGAACTTCAAGAGTGGCGAATTATGAGTATTGAGGCACAAATGAAACCTGAAAAAACTAGAAAGTTATCTTTGCCATCCAACAAAAAGAAGCCAAAACAAAAACAGATAGCTTACAGAGTTAGTCTTCATACTGCATATGATAATTTGGATTTAACAACTTATGAAGAAGTGGCTTTTAAAGAGTCATTTAACAGAAAAGAGCGAAAGGAGTTAACTGTAAAAGTATTAAAAAAAAACCTCATTGCACAGTTTCCTGAAAAATTTTCGACTCCATCAATATGTACTACATCTTCACTGTGCCAAGAAACAGATGATAATTTTTTATTTGTAAAAAAGAAAGAAATGTTAGCAGATATAAACGAGCATAAATATTTGAATCACTTTCAGAGTAAAGGTTTTTTATATGGAATCACTTTGGAATCTATACATCGCATTATATCCGATGGTCTCATTCCTATACTTGATGTTGAAATTCCAGTAAGTTTAAAGATATTGCTTTTTATTAATTGTGGTTGA

Transcript

HOLI02923.g30211.t1

Protein

Uniprot

Uniprot term	Description
O14936	Peripheral plasma membrane protein CASK OS=Homo sapiens OX=9606 GN=CASK PE=1 SV=3
O70589	Peripheral plasma membrane protein CASK OS=Mus musculus OX=10090 GN=Cask PE=1 SV=2
Q62915	Peripheral plasma membrane protein CASK OS=Rattus norvegicus OX=10116 GN=Cask PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00595	PDZ	PDZ domain	Domain	Interproscan
PF00625	Guanylate_kin	Guanylate kinase	Domain	Interproscan
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001478	Domain	PDZ domain	Interproscan
IPR036028	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR001452	Domain	SH3 domain	Interproscan
IPR008144	Domain	Guanylate kinase-like domain	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR050716	Family	Membrane-associated guanylate kinase	Interproscan
IPR008145	Domain	Guanylate kinase/L-type calcium channel beta subunit	Interproscan
IPR036034	Homologous_superfamily	PDZ superfamily	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23122	MEMBRANE-ASSOCIATED GUANYLATE KINASE MAGUK	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005102	Molecular Function	signaling receptor binding	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0005911	Cellular Component	cell-cell junction	Interproscan
GO:0034613	Biological Process	protein localization	Interproscan
GO:0046928	Biological Process	regulation of neurotransmitter secretion	Interproscan
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan