Gene detail

Detailed information of HOLI03177.G55853 in Hydra oligactis

Genomic Location: HOLI03177:20233...23954
NR annotation: NP_001296704.1, serum response factor homolog [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q90718	Serum response factor (Fragment) OS=Gallus gallus OX=9031 GN=SRF PE=2 SV=1
P23790	Serum response factor OS=Xenopus laevis OX=8355 GN=srf PE=2 SV=1
Q9JM73	Serum response factor OS=Mus musculus OX=10090 GN=Srf PE=1 SV=1

Gene family	Subfamily
Transcription Factors Family	SRF

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00319	SRF-TF	SRF-type transcription factor (DNA-binding and dimerisation domain)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036879	Homologous_superfamily	Transcription factor, MADS-box superfamily	Interproscan
IPR002100	Domain	Transcription factor, MADS-box	Interproscan
IPR033897	Domain	MADS SRF-like	Interproscan
IPR050142	Family	MADS-box/MEF2 Transcription Factor	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48019	SERUM RESPONSE FACTOR HOMOLOG	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0046983	Molecular Function	protein dimerization activity	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0000987	Molecular Function	cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0045944	Biological Process	positive regulation of transcription by RNA polymerase II	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K04378	SRF; serum response factor	-	Transcription factors	ko03000	deepkoala