Gene detail

Detailed information of HOLI03250.G1020 in Hydra oligactis

Genomic Location: HOLI03250:30003...31472
NR annotation: WP_280191620.1, PLP-dependent aminotransferase family protein [Delftia sp. PS-11]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P49309	Probable rhizopine catabolism regulatory protein MocR OS=Rhizobium meliloti OX=382 GN=mocR PE=3 SV=1
P39389	Uncharacterized HTH-type transcriptional regulator YjiR OS=Escherichia coli (strain K12) OX=83333 GN=yjiR PE=3 SV=1
Q8NS92	HTH-type pyridoxine biosynthesis transcriptional regulator PdxR OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534) OX=196627 GN=pdxR PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00155	Aminotran_1_2	Aminotransferase class I and II	Domain	Interproscan
PF00392	GntR	Bacterial regulatory proteins, gntR family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004839	Domain	Aminotransferase, class I/classII	Interproscan
IPR000524	Domain	Transcription regulator HTH, GntR	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR015421	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, major domain	Interproscan
IPR036390	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan
IPR015424	Homologous_superfamily	Pyridoxal phosphate-dependent transferase	Interproscan
IPR051446	Family	HTH-type transcriptional regulator with aminotransferase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46577	HTH-TYPE TRANSCRIPTIONAL REGULATORY PROTEIN GABR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0009058	Biological Process	biosynthetic process	Interproscan
GO:0030170	Molecular Function	pyridoxal phosphate binding	Interproscan
GO:0003700	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00375	K00375; GntR family transcriptional regulator / MocR family aminotransferase	-	Transcription factors	ko03000	deepkoala