Gene detail

Detailed information of HOLI03407.G44230 in Hydra oligactis

Genomic Location: HOLI03407:66270...93581
NR annotation: XP_047136980.1, cleavage and polyadenylation specificity factor subunit 2 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q9W799	Cleavage and polyadenylation specificity factor subunit 2 OS=Xenopus laevis OX=8355 GN=cpsf2 PE=1 SV=1
Q9P2I0	Cleavage and polyadenylation specificity factor subunit 2 OS=Homo sapiens OX=9606 GN=CPSF2 PE=1 SV=2
O35218	Cleavage and polyadenylation specificity factor subunit 2 OS=Mus musculus OX=10090 GN=Cpsf2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13299	CPSF100_C	Cleavage and polyadenylation factor 2 C-terminal	Family	Interproscan
PF07521	RMMBL	Zn-dependent metallo-hydrolase RNA specificity domain	Motif	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR025069	Domain	Cleavage and polyadenylation specificity factor 2, C-terminal	Interproscan
IPR011108	Domain	Zn-dependent metallo-hydrolase, RNA specificity domain	Interproscan
IPR027075	Family	Cleavage and polyadenylation specificity factor subunit 2	Interproscan
IPR036866	Homologous_superfamily	Ribonuclease Z/Hydroxyacylglutathione hydrolase-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45922	CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0005847	Cellular Component	mRNA cleavage and polyadenylation specificity factor complex	Interproscan
GO:0006378	Biological Process	obsolete mRNA polyadenylation	Interproscan
GO:0006398	Biological Process	mRNA 3'-end processing by stem-loop binding and cleavage	Interproscan
GO:0098789	Biological Process	obsolete pre-mRNA cleavage required for polyadenylation	Interproscan