Detailed information of HOLI03827.G56657 in Hydra oligactis

Genomic Location: HOLI03827:79335...81292
NR annotation: XP_047141703.1, tRNA (uracil-5-)-methyltransferase homolog A [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8BNV1tRNA (uracil-5-)-methyltransferase homolog A OS=Mus musculus OX=10090 GN=Trmt2a PE=1 SV=2
Q8IZ69tRNA (uracil-5-)-methyltransferase homolog A OS=Homo sapiens OX=9606 GN=TRMT2A PE=1 SV=2
A4QP75tRNA (uracil-5-)-methyltransferase homolog B OS=Danio rerio OX=7955 GN=trmt2b PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05958tRNA_U5-meth_trtRNA (Uracil-5-)-methyltransferaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR010280Family(Uracil-5)-methyltransferase familyInterproscan
IPR045850FamilytRNA (uracil(54)-C(5))-methyltransferase, metazoa typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45904TRNA (URACIL-5-)-METHYLTRANSFERASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006396Biological ProcessRNA processingInterproscan
GO:0008173Molecular FunctionRNA methyltransferase activityInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03029PSMD4, RPN10; 26S proteasome regulatory subunit N10-Proteasomeko03051deepkoala

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