Gene detail

Detailed information of HOLI04552.G4688 in Hydra oligactis

Genomic Location: HOLI04552:1...57672
NR annotation: XP_047136616.1, E3 ubiquitin-protein ligase SHPRH-like isoform X3 [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q5BHD6	DNA repair protein rad5 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=rad5 PE=3 SV=1
Q4WVM1	DNA repair protein rad5 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=rad5 PE=3 SV=2
Q4IJ84	DNA repair protein RAD5 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=RAD5 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00176	SNF2-rel_dom	SNF2-related domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000330	Domain	SNF2, N-terminal	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR038718	Homologous_superfamily	SNF2-like, N-terminal domain superfamily	Interproscan
IPR011011	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan
IPR052583	Family	ATP-dependent Helicase/E3 Ubiquitin Ligase	Interproscan
IPR001965	Domain	Zinc finger, PHD-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45865	E3 UBIQUITIN-PROTEIN LIGASE SHPRH FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0140658	Molecular Function	ATP-dependent chromatin remodeler activity	Interproscan
GO:0000209	Biological Process	protein polyubiquitination	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006974	Biological Process	DNA damage response	Interproscan
GO:0061630	Molecular Function	ubiquitin protein ligase activity	Interproscan