Gene detail

Detailed information of HOLI05983.G36092 in Hydra oligactis

Genomic Location: HOLI05983:10309...11965
NR annotation: BDT27229.1, DNA polymerase II [Bacteriovorax sp. HI3]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P21189	DNA polymerase II OS=Escherichia coli (strain K12) OX=83333 GN=polB PE=1 SV=2
O29753	DNA polymerase OS=Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16) OX=224325 GN=pol PE=3 SV=1
P95690	DNA polymerase 1 OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770) OX=330779 GN=dpo1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00136	DNA_pol_B	DNA polymerase family B	Family	Interproscan
PF03104	DNA_pol_B_exo1	DNA polymerase family B, exonuclease domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006134	Domain	DNA-directed DNA polymerase, family B, multifunctional domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR050240	Family	DNA polymerase type-B	Interproscan
IPR017964	Conserved_site	DNA-directed DNA polymerase, family B, conserved site	Interproscan
IPR023211	Homologous_superfamily	DNA polymerase, palm domain superfamily	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR006172	Family	DNA-directed DNA polymerase, family B	Interproscan
IPR006133	Domain	DNA-directed DNA polymerase, family B, exonuclease domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10322	DNA POLYMERASE CATALYTIC SUBUNIT	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000166	Molecular Function	nucleotide binding	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003887	Molecular Function	DNA-directed DNA polymerase activity	Interproscan
GO:0008296	Molecular Function	3'-5'-DNA exonuclease activity	Interproscan
GO:0009432	Biological Process	SOS response	Interproscan
GO:0045004	Biological Process	DNA replication proofreading	Interproscan