Detailed information of HSymV2.0_g01.00204_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_1:6175196...6195605
NR annotation: XP_031564557.1, katanin p60 ATPase-containing subunit A-like 2 isoform X2 [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A0JMA9Katanin p60 ATPase-containing subunit A-like 2 OS=Xenopus tropicalis OX=8364 GN=katnal2 PE=2 SV=1
Q8IYT4Katanin p60 ATPase-containing subunit A-like 2 OS=Homo sapiens OX=9606 GN=KATNAL2 PE=1 SV=3
Q9D3R6Katanin p60 ATPase-containing subunit A-like 2 OS=Mus musculus OX=10090 GN=Katnal2 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17862AAA_lid_3AAA+ lid domainDomainInterproscan
PF10584Proteasome_A_NProteasome subunit A N-terminal signatureFamilyInterproscan
PF00004AAAATPase family associated with various cellular activities (AAA)DomainInterproscan
PF00227ProteasomeProteasome subunitDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006594Conserved_siteLIS1 homology motifInterproscan
IPR041569DomainAAA ATPase, AAA+ lid domainInterproscan
IPR000426DomainProteasome alpha-subunit, N-terminal domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR003959DomainATPase, AAA-type, coreInterproscan
IPR029055Homologous_superfamilyNucleophile aminohydrolases, N-terminalInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR035144FamilyProteasome subunit alpha 1Interproscan
IPR023332FamilyProteasome alpha-type subunitInterproscan
IPR027497FamilyKatanin p60 ATPase-containing subunit A-like 2Interproscan
IPR001353FamilyProteasome, subunit alpha/betaInterproscan
IPR050304FamilyMicrotubule-severing AAA ATPaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23074AAA DOMAIN-CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0019773Cellular Componentproteasome core complex, alpha-subunit complexInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0005839Cellular Componentproteasome core complexInterproscan
GO:0051603Biological Processproteolysis involved in protein catabolic processInterproscan
GO:0140603Molecular Functionobsolete ATP hydrolysis activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K07767KATNA1; katanin p60 ATPase-containing subunit A1EC:5.6.1.1
Cytoskeleton proteinsko04812deepkoala

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