Genomic Location: HiC_scaffold_1:9687290...9722201
NR annotation: XP_047141184.1, probable E3 ubiquitin-protein ligase HERC1 isoform X1 [Hydra vulgaris]
| CDS | ||||
| HSymV2.0_g01.00472_t1 | ||||
| Transcript |
| HSymV2.0_g01.00472_t1 |
| Protein |
| HSymV2.0_g01.00472_t1 |
| Uniprot term | Description |
|---|---|
| Q15751 | Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens OX=9606 GN=HERC1 PE=1 SV=2 |
| O95714 | E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens OX=9606 GN=HERC2 PE=1 SV=2 |
| Q4U2R1 | E3 ubiquitin-protein ligase HERC2 OS=Mus musculus OX=10090 GN=Herc2 PE=1 SV=3 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00415 | RCC1 | Regulator of chromosome condensation (RCC1) repeat | Repeat | Interproscan |
| PF09588 | YqaJ | YqaJ-like viral recombinase domain | Domain | Interproscan |
| PF00622 | SPRY | SPRY domain | Family | Interproscan |
| PF13540 | RCC1_2 | Regulator of chromosome condensation (RCC1) repeat | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR011604 | Homologous_superfamily | PD-(D/E)XK endonuclease-like domain superfamily | Interproscan |
| IPR000408 | Repeat | Regulator of chromosome condensation, RCC1 | Interproscan |
| IPR007527 | Domain | Zinc finger, SWIM-type | Interproscan |
| IPR051625 | Family | Diverse Signaling and Regulatory Domain-Containing Protein | Interproscan |
| IPR036322 | Homologous_superfamily | WD40-repeat-containing domain superfamily | Interproscan |
| IPR001680 | Repeat | WD40 repeat | Interproscan |
| IPR001870 | Domain | B30.2/SPRY domain | Interproscan |
| IPR015943 | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| IPR015940 | Domain | Ubiquitin-associated domain | Interproscan |
| IPR019080 | Domain | YqaJ viral recombinase | Interproscan |
| IPR013320 | Homologous_superfamily | Concanavalin A-like lectin/glucanase domain superfamily | Interproscan |
| IPR011335 | Homologous_superfamily | Restriction endonuclease type II-like | Interproscan |
| IPR003877 | Domain | SPRY domain | Interproscan |
| IPR009091 | Homologous_superfamily | Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II | Interproscan |
| IPR043136 | Homologous_superfamily | B30.2/SPRY domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR22872 | BTK-BINDING PROTEIN-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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