Detailed information of HSymV2.0_g01.01041_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_1:17596499...17658755
NR annotation: XP_047139331.1, laminin subunit alpha-1 isoform X1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P02469Laminin subunit beta-1 OS=Mus musculus OX=10090 GN=Lamb1 PE=1 SV=3
Q60675Laminin subunit alpha-2 OS=Mus musculus OX=10090 GN=Lama2 PE=1 SV=2
G5ECE3Laminin subunit alpha lam-3 OS=Caenorhabditis elegans OX=6239 GN=lam-3 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00053Laminin_EGFLaminin EGF domainDomainInterproscan
PF00168C2C2 domainDomainInterproscan
PF15711ILEIInterleukin-like EMT inducerDomainInterproscan
PF02210Laminin_G_2Laminin G domainDomainInterproscan
PF00054Laminin_G_1Laminin G domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002049DomainLaminin-type EGF domainInterproscan
IPR035892Homologous_superfamilyC2 domain superfamilyInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR001791DomainLaminin G domainInterproscan
IPR000008DomainC2 domainInterproscan
IPR008211DomainLaminin, N-terminalInterproscan
IPR050440FamilyLaminin/Netrin Extracellular MatrixInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR039477DomainILEI/PANDER domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10574NETRIN/LAMININ-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0009887Biological Processanimal organ morphogenesisInterproscan
GO:0009888Biological Processtissue developmentInterproscan

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