Detailed information of HSymV2.0_g01.01143_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_1:18807870...18859739
NR annotation: XP_047132275.1, DNA topoisomerase 3-alpha isoform X2 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q13472DNA topoisomerase 3-alpha OS=Homo sapiens OX=9606 GN=TOP3A PE=1 SV=1
O70157DNA topoisomerase 3-alpha OS=Mus musculus OX=10090 GN=Top3a PE=2 SV=1
Q9NG98DNA topoisomerase 3-alpha OS=Drosophila melanogaster OX=7227 GN=Top3alpha PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01751ToprimToprim domainFamilyInterproscan
PF06839zf-GRFGRF zinc fingerDomainInterproscan
PF01131Topoisom_bacDNA topoisomeraseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR034144DomainDNA topoisomerase 3-like, TOPRIM domainInterproscan
IPR013824Homologous_superfamilyDNA topoisomerase, type IA, central region, subdomain 1Interproscan
IPR006171DomainTOPRIM domainInterproscan
IPR023406Active_siteDNA topoisomerase, type IA, active siteInterproscan
IPR010666DomainZinc finger, GRF-typeInterproscan
IPR013825Homologous_superfamilyDNA topoisomerase, type IA, central region, subdomain 2Interproscan
IPR023405Homologous_superfamilyDNA topoisomerase, type IA, core domainInterproscan
IPR013826Homologous_superfamilyDNA topoisomerase, type IA, central region, subdomain 3Interproscan
IPR013497DomainDNA topoisomerase, type IA, centralInterproscan
IPR000380FamilyDNA topoisomerase, type IAInterproscan
IPR003601DomainDNA topoisomerase, type IA, domain 2Interproscan
IPR003602DomainDNA topoisomerase, type IA, DNA-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11390PROKARYOTIC DNA TOPOISOMERASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003917Molecular FunctionDNA topoisomerase type I (single strand cut, ATP-independent) activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003916Molecular FunctionDNA topoisomerase activityInterproscan
GO:0006265Biological ProcessDNA topological changeInterproscan
GO:0005634Cellular ComponentnucleusInterproscan

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