Detailed information of HSymV2.0_g01.01409_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_1:24011046...24065373
NR annotation: XP_012556098.2, vacuolar protein sorting-associated protein 33B isoform X2 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9H267Vacuolar protein sorting-associated protein 33B OS=Homo sapiens OX=9606 GN=VPS33B PE=1 SV=2
Q2HJ18Vacuolar protein sorting-associated protein 33B OS=Bos taurus OX=9913 GN=VPS33B PE=2 SV=1
P59016Vacuolar protein sorting-associated protein 33B OS=Mus musculus OX=10090 GN=Vps33b PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00053Laminin_EGFLaminin EGF domainDomainInterproscan
PF00054Laminin_G_1Laminin G domainDomainInterproscan
PF02493MORNMORN repeatRepeatInterproscan
PF00995Sec1Sec1 familyFamilyInterproscan
PF02210Laminin_G_2Laminin G domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043155Homologous_superfamilyVacuolar protein sorting-associated protein 33, domain 3bInterproscan
IPR001791DomainLaminin G domainInterproscan
IPR002049DomainLaminin-type EGF domainInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR027482Homologous_superfamilySec1-like, domain 2Interproscan
IPR043154Homologous_superfamilySec1-like, domain 1Interproscan
IPR003409RepeatMORN repeatInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR043127Homologous_superfamilySec1-like, domain 3aInterproscan
IPR036045Homologous_superfamilySec1-like superfamilyInterproscan
IPR001619FamilySec1-like proteinInterproscan
IPR000034DomainLaminin IVInterproscan
IPR008211DomainLaminin, N-terminalInterproscan
IPR050440FamilyLaminin/Netrin Extracellular MatrixInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10574NETRIN/LAMININ-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0009887Biological Processanimal organ morphogenesisInterproscan
GO:0009888Biological Processtissue developmentInterproscan

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