Gene detail

Detailed information of HSymV2.0_g01.01786_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_1:29202308...29215719
NR annotation: XP_044171434.1, uncharacterized protein LOC114950689 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

HSymV2.0_g01.01786_t1

ATGTGTATAAAACAGaatcccagttttcaattatcaatcttaatggcttgtagacagggtcgcagaaagagagccaaaatcgatcataatgaagtggcagtgactcatgtaacgaaaggtgtagatcaggacgggctgagaaaatattacataaataaagaaataggtttcggagtttacgcagaaaagaattttacgaagggggagttcttattggagtatcctggagaacttattagcgccgaggaaggagaaaaaaggcagcaacgctataacgctaaatttggttcattcttgttttttttcaacaaatgttgtattgacggaaccttctcagagcggttaggtaaatacgtcaacgatagcgcagtggcgttttgtaattctaaaatgcgccctatagaagttaacggcagagtccatttctgtctgttcgttcttgttaacgaaatagtggccggaaccgaattaagatattcctatggtgacagcaatcttccttggagaacaaataaaaacaccaagatgcctattacgattgcaccaaaagtctctacgGTTTCAGAGAAGTTTAATTCAGAGATGGGACATGAAAAACTGGTTTCAGAGAAGTTAAATTCAGAGATGGGACATGAAAAACTGGTTTCAGAGAAGTTTAATTCAGAGATGGGACATAAAAAACTGGTTTCAGAGAAGTTTAATTCAGAGATGGGACATGAAAAACTGGTTTCAGAGAAGGCTAATTCAGAAATGGGACATAAGAAAATGTTTTTCGATAGTGATGACGAAGTGGACATGAACATCACGAGGCAGCTTGTTTCCAGCTTTGTTGAAAATAAGAACTCTGTCGAGAATTCAACTGAAGAAGAGGATGAGGAAGAATATGAAATTTTGCGGAAGGCCGAAGATGCACAACCAAATATTTCTGACTTCCAGAAATCCTTTATTAACGATTCCGGCTTGTTTGGCGATATGCTCAGTGTTaatgagacatacgaagaagaatatgaaaaagaatcagaCAACGATTCTGAATTAGATGATACACGGGACACAATATCTTACAAACCTTCAGAATCAAGTGAAAGTGAGGAATATGACAGCGAACACGGCGACGGTGGCAATAAAAATAAAGTTACTGTGAAAATTGACGATATAAATGGTATGGATGTTTTCAATTTCCGTGAGGCAGATGCAGAAAGCGAAAGAGAGAACGAAGAAGAATTAATTGAAGGTGTTATAATTCCTATGACGAACAAAACGAAAAGTGGACTCAGGATTTACGACAGAGTACATGCTTGTTACTTTTGCGGGACACTTACCTCAAAATTGTCACAACATCTTTTTCGCCACCACAATAAAGAGCAAGTGGTGCAAGCAATCTTAAACCTTTCCGTTAAAGATAAAAATGAGTCGGTCAAACGAAAACATGCAATTGACGCTCTACGAAAAAAAGGCGACTTTTTTCATAACACAAAGGTCTTGAAAGCAGGACATGGTAGTATGATTATCTACCGACAGTCAAAAGGATTACACAAGCCCGACGACTATATACCATGCAAATTTTGTCTGGGTTTCTTTTACGCTGGTGACATAAACAGACATTGTAAAAGATGCGTGCATCGAAAAAGTGAAGGAGATGAGCACCACATTAACATTCAAAATCAGTGTGAACTGCTTCTGTACCCCCAAAAAAAACCGGTTAGTGGTTCAATAGAACTGCAAGAATCTGTTGTCCAACCAATGAATAACGACAATATTAAAGAACTTATTAAGAGCGACGAACTAATCCTTACATATGGATCGTTTATTGTCAGTGGAAAGGGGGTTAAAAAATCGTCCAACATTTCACAGAAAATGAGAATATTGGCCAGGTTGGTTTTGGAAATAAGAAGAAATGCAAGCATGAAAGATTTCTCATTGCTGGACTGTTTAACTCCAGCTTTCTTTGATGATGTTGTTGAGGCCACCAAACGTCTTGCTGGGTTTACAAACACCAATAATGACGGTGAAAAAGTGCCCGCATTTAATAAGCCATCATTAGCATTAAAACTCGGTTACGCTGTCGAGAACTGTGCCATGTTGTTGCAAGGGCTTGGTCTAAGAAAAGGTGATGACACAATTGTTGTTAAGGCGCAGAAATTTCAGAAAATCTTTCAAAGTGAATGGTCTGTGAGGATTTCTTCTGCTTCCTTGCGTTCCTTGGCTGATAATAGATTCAACAAAGATGATATCCTGCCATTAACATCAGACTTGCTTCTCTTGAAATCGTAG

Transcript

HSymV2.0_g01.01786_t1

Protein

Uniprot

Uniprot term	Description
Q2YDW7	N-lysine methyltransferase KMT5A OS=Mus musculus OX=10090 GN=Kmt5a PE=1 SV=1
Q2YDJ8	N-lysine methyltransferase KMT5A OS=Bos taurus OX=9913 GN=KMT5A PE=2 SV=1
Q9NQR1	N-lysine methyltransferase KMT5A OS=Homo sapiens OX=9606 GN=KMT5A PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00856	SET	SET domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR046341	Homologous_superfamily	SET domain superfamily	Interproscan
IPR001214	Domain	SET domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR33480	SET DOMAIN-CONTAINING PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan