Detailed information of HSymV2.0_g02.02106_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_2:186751...189036
NR annotation: MCF7928236.1, methionine--tRNA ligase [Spirochaetales bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q73NT9Methionine--tRNA ligase OS=Treponema denticola (strain ATCC 35405 / DSM 14222 / CIP 103919 / JCM 8153 / KCTC 15104) OX=243275 GN=metG PE=3 SV=1
A1R019Methionine--tRNA ligase OS=Borrelia turicatae (strain 91E135) OX=314724 GN=metG PE=3 SV=1
B2S0T6Methionine--tRNA ligase OS=Borrelia hermsii (strain HS1 / DAH) OX=314723 GN=metG PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09334tRNA-synt_1gtRNA synthetases class I (M)FamilyInterproscan
PF01588tRNA_bindPutative tRNA binding domainDomainInterproscan
PF19303Anticodon_3Anticodon binding domain of methionyl tRNA ligaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029038Homologous_superfamilyMethionyl-tRNA synthetase, Zn-domainInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR009080Homologous_superfamilyAminoacyl-tRNA synthetase, class Ia, anticodon-bindingInterproscan
IPR014758FamilyMethionyl-tRNA synthetaseInterproscan
IPR041872DomainMethionyl-tRNA synthetase, anticodon-binding domainInterproscan
IPR015413DomainMethionyl/Leucyl tRNA synthetaseInterproscan
IPR023458FamilyMethionine-tRNA ligase, type 1Interproscan
IPR002547DomaintRNA-binding domainInterproscan
IPR033911DomainMethioninyl-tRNA synthetase core domainInterproscan
IPR001412Conserved_siteAminoacyl-tRNA synthetase, class I, conserved siteInterproscan
IPR014729Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45765METHIONINE--TRNA LIGASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0004825Molecular Functionmethionine-tRNA ligase activityInterproscan
GO:0006431Biological Processmethionyl-tRNA aminoacylationInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0017101Cellular Componentaminoacyl-tRNA synthetase multienzyme complexInterproscan
GO:0000049Molecular FunctiontRNA bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01874MARS, metG; methionyl-tRNA synthetaseEC:6.1.1.10
Transfer RNA biogenesisko03016deepkoala

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