Gene detail

Detailed information of HSymV2.0_g02.02201_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_2:384993...385406
NR annotation: MCD6397613.1, 50S ribosomal protein L11 [Spirochaetaceae bacterium]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P62443	Large ribosomal subunit protein uL11 OS=Treponema denticola (strain ATCC 35405 / DSM 14222 / CIP 103919 / JCM 8153 / KCTC 15104) OX=243275 GN=rplK PE=3 SV=1
B0KCI8	Large ribosomal subunit protein uL11 OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) OX=340099 GN=rplK PE=3 SV=1
B0K5G4	Large ribosomal subunit protein uL11 OS=Thermoanaerobacter sp. (strain X514) OX=399726 GN=rplK PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00298	Ribosomal_L11	Ribosomal protein L11, RNA binding domain	Domain	Interproscan
PF03946	Ribosomal_L11_N	Ribosomal protein L11, N-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006519	Family	Large ribosomal subunit protein uL11, bacterial-type	Interproscan
IPR000911	Family	Ribosomal protein uL11	Interproscan
IPR036796	Homologous_superfamily	Large ribosomal subunit protein uL11, N-terminal domain superfamily	Interproscan
IPR020783	Domain	Large ribosomal subunit protein uL11, C-terminal	Interproscan
IPR020785	Conserved_site	Large ribosomal subunit protein uL11, conserved site	Interproscan
IPR020784	Domain	Large ribosomal subunit protein uL11, N-terminal	Interproscan
IPR036769	Homologous_superfamily	Large ribosomal subunit protein uL11, C-terminal domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11661	60S RIBOSOMAL PROTEIN L12	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003735	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840	Cellular Component	ribosome	Interproscan
GO:0006412	Biological Process	translation	Interproscan
GO:0015934	Cellular Component	large ribosomal subunit	Interproscan
GO:0070180	Molecular Function	large ribosomal subunit rRNA binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02867	RP-L11, MRPL11, rplK; large subunit ribosomal protein L11	-	Ribosome	ko03011	deepkoala