Gene detail

Detailed information of HSymV2.0_g02.02209_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_2:398764...399816
NR annotation: MBQ4874703.1, ATP-dependent Clp protease ATP-binding subunit ClpX [Rickettsiaceae bacterium H1]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
A1B1H7	ATP-dependent Clp protease ATP-binding subunit ClpX OS=Paracoccus denitrificans (strain Pd 1222) OX=318586 GN=clpX PE=3 SV=1
A3PKS0	ATP-dependent Clp protease ATP-binding subunit ClpX OS=Cereibacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) OX=349101 GN=clpX PE=3 SV=1
B9KJU8	ATP-dependent Clp protease ATP-binding subunit ClpX OS=Cereibacter sphaeroides (strain KD131 / KCTC 12085) OX=557760 GN=clpX PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10431	ClpB_D2-small	C-terminal, D2-small domain, of ClpB protein	Domain	Interproscan
PF07724	AAA_2	AAA domain (Cdc48 subfamily)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR019489	Domain	Clp ATPase, C-terminal	Interproscan
IPR003959	Domain	ATPase, AAA-type, core	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR004487	Family	Clp protease, ATP-binding subunit ClpX	Interproscan
IPR050052	Family	ATP-dependent Clp protease ATP-binding subunit ClpX	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48102	ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0006457	Biological Process	protein folding	Interproscan
GO:0051082	Molecular Function	unfolded protein binding	Interproscan
GO:0140662	Molecular Function	ATP-dependent protein folding chaperone	Interproscan
GO:0009376	Cellular Component	HslUV protease complex	Interproscan
GO:0051301	Biological Process	cell division	Interproscan
GO:0051603	Biological Process	proteolysis involved in protein catabolic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03544	clpX, CLPX; ATP-dependent Clp protease ATP-binding subunit ClpX	-	Chaperones and folding catalysts	ko03110	deepkoala