Detailed information of HSymV2.0_g02.02279_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_2:547538...548584
NR annotation: MBQ4875355.1, cysteine--tRNA ligase [Rickettsiaceae bacterium H1]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q2GG67Cysteine--tRNA ligase OS=Ehrlichia chaffeensis (strain ATCC CRL-10679 / Arkansas) OX=205920 GN=cysS PE=3 SV=1
Q3YSF3Cysteine--tRNA ligase OS=Ehrlichia canis (strain Jake) OX=269484 GN=cysS PE=3 SV=1
Q5HBK5Cysteine--tRNA ligase OS=Ehrlichia ruminantium (strain Welgevonden) OX=254945 GN=cysS PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01406tRNA-synt_1etRNA synthetases class I (C) catalytic domainFamilyInterproscan
PF09190DALR_2DALR domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032678DomaintRNA synthetases class I, catalytic domainInterproscan
IPR015803FamilyCysteine-tRNA ligaseInterproscan
IPR009080Homologous_superfamilyAminoacyl-tRNA synthetase, class Ia, anticodon-bindingInterproscan
IPR024909FamilyCysteinyl-tRNA synthetase/mycothiol ligaseInterproscan
IPR014729Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR015273DomainCysteinyl-tRNA synthetase, class Ia, DALRInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10890CYSTEINYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004817Molecular Functioncysteine-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006423Biological Processcysteinyl-tRNA aminoacylationInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01883CARS, cysS; cysteinyl-tRNA synthetaseEC:6.1.1.16
Transfer RNA biogenesisko03016deepkoala

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