Detailed information of HSymV2.0_g02.02330_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_2:654552...655535
NR annotation: MBQ4874692.1, tryptophan--tRNA ligase [Rickettsiaceae bacterium H1]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8YXE4Tryptophan--tRNA ligase OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=trpS PE=3 SV=1
Q7VBM9Tryptophan--tRNA ligase OS=Prochlorococcus marinus (strain SARG / CCMP1375 / SS120) OX=167539 GN=trpS PE=3 SV=1
P73655Tryptophan--tRNA ligase OS=Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa) OX=1111708 GN=trpS PE=3 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00579tRNA-synt_1btRNA synthetases class I (W and Y)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001412Conserved_siteAminoacyl-tRNA synthetase, class I, conserved siteInterproscan
IPR002305FamilyAminoacyl-tRNA synthetase, class IcInterproscan
IPR002306FamilyTryptophan-tRNA ligaseInterproscan
IPR014729Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR024109FamilyTryptophan-tRNA ligase, bacterial-typeInterproscan
IPR050203FamilyTryptophan--tRNA ligaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43766TRYPTOPHAN--TRNA LIGASE, MITOCHONDRIALInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0004830Molecular Functiontryptophan-tRNA ligase activityInterproscan
GO:0006436Biological Processtryptophanyl-tRNA aminoacylationInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01867WARS, trpS; tryptophanyl-tRNA synthetaseEC:6.1.1.2
Transfer RNA biogenesisko03016deepkoala

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