Gene detail

Detailed information of HSymV2.0_g02.02479_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_2:979655...981031
NR annotation: MBQ4875058.1, PleD family two-component system response regulator [Rickettsiaceae bacterium H1]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q9A5I5	Response regulator PleD OS=Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15) OX=190650 GN=pleD PE=1 SV=1
B8GZM2	Response regulator PleD OS=Caulobacter vibrioides (strain NA1000 / CB15N) OX=565050 GN=pleD PE=1 SV=1
Q73RG3	Diguanylate cyclase A OS=Treponema denticola (strain ATCC 35405 / DSM 14222 / CIP 103919 / JCM 8153 / KCTC 15104) OX=243275 GN=dgcA PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00990	GGDEF	Diguanylate cyclase, GGDEF domain	Domain	Interproscan
PF00072	Response_reg	Response regulator receiver domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011006	Homologous_superfamily	CheY-like superfamily	Interproscan
IPR001789	Domain	Signal transduction response regulator, receiver domain	Interproscan
IPR000160	Domain	GGDEF domain	Interproscan
IPR029787	Homologous_superfamily	Nucleotide cyclase	Interproscan
IPR050469	Family	Bacterial Diguanylate Cyclase	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45138	REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000160	Biological Process	phosphorelay signal transduction system	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0043709	Biological Process	cell adhesion involved in single-species biofilm formation	Interproscan
GO:0052621	Molecular Function	diguanylate cyclase activity	Interproscan
GO:1902201	Biological Process	negative regulation of bacterial-type flagellum-dependent cell motility	Interproscan