Gene detail

Detailed information of HSymV2.0_g02.03208_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_2:16203827...16212546
NR annotation: XP_012563324.2, mesoderm induction early response protein 1-like [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
Q7T105	Mesoderm induction early response protein 1 OS=Xenopus laevis OX=8355 GN=mier1 PE=2 SV=1
Q8N108	Mesoderm induction early response protein 1 OS=Homo sapiens OX=9606 GN=MIER1 PE=1 SV=2
Q5REE1	Mesoderm induction early response protein 1 OS=Pongo abelii OX=9601 GN=MIER1 PE=2 SV=2

Gene family	Subfamily
Transcription Factors Family	MYB

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01448	ELM2	ELM2 domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000949	Domain	ELM2 domain	Interproscan
IPR001005	Domain	SANT/Myb domain	Interproscan
IPR017884	Domain	SANT domain	Interproscan
IPR040138	Family	Mesoderm induction early response protein/metastasis-associated protein	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10865	METASTASIS-ASSOCIATED PROTEIN AND MESODERM INDUCTION EARLY RESPONSE PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000122	Biological Process	negative regulation of transcription by RNA polymerase II	Interproscan
GO:0003714	Molecular Function	transcription corepressor activity	Interproscan
GO:0005654	Cellular Component	nucleoplasm	Interproscan
GO:0016575	Biological Process	obsolete histone deacetylation	Interproscan
GO:0042826	Molecular Function	histone deacetylase binding	Interproscan